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cn_combo_scaffold_11757_4

Organism: CN-SCN_Sphingobium_10x

partial RP 17 / 55 BSCG 15 / 51 ASCG 2 / 38 MC: 1
Location: comp(4926..5417)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomona similarity UNIPROT
DB: UniProtKB
  • Identity: 80.2
  • Coverage: 162.0
  • Bit_score: 279
  • Evalue 4.20e-72
ribosomal large subunit pseudouridine synthase E (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 81.5
  • Coverage: 162.0
  • Bit_score: 273
  • Evalue 4.70e-71
Pseudouridine synthase n=1 Tax=Loktanella vestfoldensis SKA53 RepID=A3V829_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 79.8
  • Coverage: 163.0
  • Bit_score: 278
  • Evalue 5.20e-72

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Taxonomy

Novosphingobium resinovorum → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 492
GCGCGCTCGCCTTCGCCGCGCCCGACGCTCTCGGCCTATATCGACGTGCCGGGCGTCTATCCGGCCGGACGGCTGGACCGGGACAGCGAAGGGCTGCTGCTGCTCACCGATGACGGGCGGCTGCAGGCGCGCATATCCGATCCGCGCTGCAAGACGCCCAAGACTTATCTGGTGCAGGTGGAGGGCGAGCCGGATGAGGCGGCGCTGGAGCGGTTGCGCCACGGCGTCACGCTCAATGACGGCCCGACCCGTCCCGCGCAGGCCGAGCGCATCGCGCCGCCCGAGCTGTGGGAGCGCGATCCGCCGATCCGCGTGCGCAAGAGCGTGCCCGATTGCTGGCTGCGCCTGACCATCAGCGAAGGCCGCAACCGGCAGGTGCGCCGCATGACGGCGGCGGTCGGCCATCCGACGCTGCGTCTGGTGCGCTGGCAGGTTGGCGACTGGACGCTCGACGGGCTGGCGCCGGGAACATGGCGTGAGGTGGCGGTCTAG
PROTEIN sequence
Length: 164
ARSPSPRPTLSAYIDVPGVYPAGRLDRDSEGLLLLTDDGRLQARISDPRCKTPKTYLVQVEGEPDEAALERLRHGVTLNDGPTRPAQAERIAPPELWERDPPIRVRKSVPDCWLRLTISEGRNRQVRRMTAAVGHPTLRLVRWQVGDWTLDGLAPGTWREVAV*