ggKbase home page

cn_combo_scaffold_11960_3

Organism: CN-SCN_Sphingobium_10x

partial RP 17 / 55 BSCG 15 / 51 ASCG 2 / 38 MC: 1
Location: comp(1847..2704)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rR similarity UNIPROT
DB: UniProtKB
  • Identity: 95.0
  • Coverage: 279.0
  • Bit_score: 529
  • Evalue 3.10e-147
ksgA; dimethyladenosine transferase (EC:2.1.1.-) similarity KEGG
DB: KEGG
  • Identity: 90.3
  • Coverage: 279.0
  • Bit_score: 509
  • Evalue 5.20e-142
  • rbh
16S rRNA methyltransferase n=1 Tax=Sphingobium xenophagum RepID=UPI00037217FB similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 285.0
  • Bit_score: 563
  • Evalue 1.10e-157

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobium japonicum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 858
ATGCCGCCTGAAGCCAGGGTGAAGCTGCCGCCGCTGCGGGACGTGATCGCCACGCACGGGCTTCAGGCCAGCAAGGCGCTGGGGCAGAATTTCCTGCTCGACGAACAATTGCTCGACCGGATCGCCGCTATCCCCGGCGCGATCGACGGCCAGCCCGCGTTCGAGGTCGGCCCCGGCCCCGGCGGCCTAACCCGCGCCATATTGCGCGCGGGCGCACGCCTCGTCGCGGTGGAGCGTGACCGGCGTTGCCTGCCGGCATTGGCGGAACTGGACGCCGCCTTTCCGGGGCAGTTGCGCATCCTGTCGGGCGACGCGATGGAAATCGACGCCCGCGCGGAAGCGGGCGATGGCGCGCATATCATCGCCAACCTGCCCTATAATGTTGGCACCGCGCTGCTGATCGGCTGGCTGTCGGCTGACTGGTCGCCGCTCCCCTGGTGGTCCACGCTGACGCTGATGTTCCAGATGGAGGTCGCCGAACGCATCGTCGCCCAGCCCGGCACGGATCATTATGGCCGCCTCGCCATCCTGTCCCAATGGCGCAGCGACGCGCGCATCGCGATGAAGGTCCACCGCAGCGCCTTCACCCCGCCGCCCAAGGTCATGTCCGCCGTCGTTCACCTGACGCCCAAGGCCGCGCCGGACGGCGTGCAGCTAAAGCATCTCGAACGCCTGACCGCCGCCGCCTTTGGCCAGCGCCGCAAAATGCTGCGGCAAAGCCTCAAGGGCTTGCCCGGCGCGCTCGATGCCCTGGCAGAGGTCGGCATCGACCCGCAACGCCGCGCCGAAACGGTCAGCGTCGATGAATTTGTCGCGGTGGCAAGGGTGCTGGGGCGGCAGGCTCGCGCTGCGCCTTAG
PROTEIN sequence
Length: 286
MPPEARVKLPPLRDVIATHGLQASKALGQNFLLDEQLLDRIAAIPGAIDGQPAFEVGPGPGGLTRAILRAGARLVAVERDRRCLPALAELDAAFPGQLRILSGDAMEIDARAEAGDGAHIIANLPYNVGTALLIGWLSADWSPLPWWSTLTLMFQMEVAERIVAQPGTDHYGRLAILSQWRSDARIAMKVHRSAFTPPPKVMSAVVHLTPKAAPDGVQLKHLERLTAAAFGQRRKMLRQSLKGLPGALDALAEVGIDPQRRAETVSVDEFVAVARVLGRQARAAP*