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cn_combo_scaffold_12372_5

Organism: CN-SCN_Sphingobium_10x

partial RP 17 / 55 BSCG 15 / 51 ASCG 2 / 38 MC: 1
Location: 3498..5168

Top 3 Functional Annotations

Value Algorithm Source
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO: similarity UNIPROT
DB: UniProtKB
  • Identity: 90.8
  • Coverage: 556.0
  • Bit_score: 1040
  • Evalue 0.0
2-isopropylmalate synthase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJ62_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 90.8
  • Coverage: 556.0
  • Bit_score: 1040
  • Evalue 0.0
leuA; 2-isopropylmalate synthase similarity KEGG
DB: KEGG
  • Identity: 90.8
  • Coverage: 556.0
  • Bit_score: 1040
  • Evalue 0.0

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Taxonomy

Sphingobium sp. SYK-6 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1671
ATGATGCTCAGCGATCCTTCCCAGAAATACCGCCCGTTCCCGCAGGTGGATCTGCCCGACCGGCAATGGCCCTCGCGCACCATCACCAAGCCGCCGCGCTGGCTCTCCACGGACATGCGCGACGGCAATCAGGCGCTCATCGACCCGATGGACACCGAGAAGAAGACCCGTTTCTTCGAGATGCTGGTGAAGATCGGCATCAAGGAGATCGAGGTCGGCTTCCCCTCCGCCGGCGCCACCGAGTATGATTTCATCTCCGGCCTCGTCCAGTCCGGCCGCATCCCGGACGACGTGATCGTCCAGGTGCTCACCCAGGCCCGCCGCGACCTGATCGAGCGCACGTTCGAGAGCCTGCGCGGCGCGCCCAGGGCCATCGTCCACGTCTATAATGCCGTGTCGCCCGCGTGGCGCCGCATCGTGTTCAACATGGAGCGGCCGCAGATCAAGCAGATCGCCATCGACGCGGCCAAGATCATCCGTGACGAGGCGGGCAAGCAGCCCAATACCGATTGGCATTTCGAATATTCGCCCGAAACCTTCTCCACCGCCGAGCTGGATTTCAGCCTGGAGTGCTGCGAGGCGGTGATGGATATTCTCCAGCCCACGGCGGAAAAGCCGCTGATCCTCAACCTGCCGGCCACGGTGGAAGCAGCCACGCCCAATATCTACGCCGACCAGATCGAATGGTTCTGCCGGCACATCCGCAACCGCGACTCGGTCTGCATCTCGCTGCATCCGCATAACGACCGGGGCACCGGCATCGCGGCGGCCGAGCTGGGCCTGATGGCCGGCGCGGACCGGGTCGAGGGCTGCCTGTTCGGCAATGGCGAGCGCACCGGCAATTGCGATCTCGTCACCGTCGCGCTCAACATGTATACGCAGGGCATCGCGCCGGGGCTGGACTTCTCCAACATGGAGGAGATCGTGCAGACGGTGACTTACTGCAACCAGCTCCCCGTCCACCCGCGCCATCCTTATGCGGGCGAGTTGGTATTCACCGCCTTCTCCGGCAGCCACCAGGACGCCATCAAGAAGGGCTTCGCCGCGCAGGAACAGCGCAACGATCAGCTCTGGGACGTGCCCTATCTGCCGATCGACCCGGCGGATATCGGCTGCTCCTACGAGGCGGTGATCCGCGTCAACTCGCAATCCGGCAAGGGCGGCGTGGCGTGGGTGCTCCAGCAGGACAAGGGCCTCAAGCTGCCCAAGCGCATGCAGGCGGATTTCAGCCGCGTCGTGCAGGAGATGGCCGACCAGTCCAGCCGCGAACTGCACGCCGCCGACATCTGGGAGGCGTTCGAGCAGCATTATTGCCTGAGCGACGGCCAGCCGTTCCAGCTCGTCGACTATGTCGAGGGCGGCCCGGCGGGCAACCGCGTGTTCACCGGCAAGATCGCCCATAATGGCGAGGAGCGCAGCGTCTCCGGGCGCGGCAACGGCCTCATCTCCAGCGTGCTCTCCGCGCTGCGCGAGGAACTGGATATCGGCCTCGACGTGGTCGACTATAGCGAGCACGCCATCGGCAAGGGCGGCGATGTCCACGCCGCCGCCTATGTCGAGTGCCACACGGACGACGGCCTCACCCTGTTCGGCGTCGGGCTGGACACGGACATCGCCACCGCCTCCGTGCAGGCGGTGCTCTCCGTCGCCAATGCGCTGGAACGGCGCAAC
PROTEIN sequence
Length: 557
MMLSDPSQKYRPFPQVDLPDRQWPSRTITKPPRWLSTDMRDGNQALIDPMDTEKKTRFFEMLVKIGIKEIEVGFPSAGATEYDFISGLVQSGRIPDDVIVQVLTQARRDLIERTFESLRGAPRAIVHVYNAVSPAWRRIVFNMERPQIKQIAIDAAKIIRDEAGKQPNTDWHFEYSPETFSTAELDFSLECCEAVMDILQPTAEKPLILNLPATVEAATPNIYADQIEWFCRHIRNRDSVCISLHPHNDRGTGIAAAELGLMAGADRVEGCLFGNGERTGNCDLVTVALNMYTQGIAPGLDFSNMEEIVQTVTYCNQLPVHPRHPYAGELVFTAFSGSHQDAIKKGFAAQEQRNDQLWDVPYLPIDPADIGCSYEAVIRVNSQSGKGGVAWVLQQDKGLKLPKRMQADFSRVVQEMADQSSRELHAADIWEAFEQHYCLSDGQPFQLVDYVEGGPAGNRVFTGKIAHNGEERSVSGRGNGLISSVLSALREELDIGLDVVDYSEHAIGKGGDVHAAAYVECHTDDGLTLFGVGLDTDIATASVQAVLSVANALERRN