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cn_combo_scaffold_12413_2

Organism: CN-SCN_Sphingobium_10x

partial RP 17 / 55 BSCG 15 / 51 ASCG 2 / 38 MC: 1
Location: 415..1593

Top 3 Functional Annotations

Value Algorithm Source
ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12) similarity KEGG
DB: KEGG
  • Identity: 65.8
  • Coverage: 380.0
  • Bit_score: 494
  • Evalue 2.40e-137
Bifunctional enzyme IspD/IspF n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0IRT0_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 66.8
  • Coverage: 382.0
  • Bit_score: 507
  • Evalue 1.60e-140
Bifunctional enzyme IspD/IspF {ECO:0000256|HAMAP-Rule:MF_01520, ECO:0000256|SAAS:SAAS00096235}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadacea similarity UNIPROT
DB: UniProtKB
  • Identity: 66.8
  • Coverage: 382.0
  • Bit_score: 507
  • Evalue 2.30e-140

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Taxonomy

Sphingobium quisquiliarum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1179
ATGGCGGATGGGCGTTCCAATATTGCACTGATCGTCGCGGCCGGGTCCGGCAGTCGGGTCGGCGGCGATGTCCCCAAGCAGTTCCGCCGCGTCGGTGGGGAGACTTTGCTCGCCCACAGCGTCGATGCCTTTGCTGGTCATCCCGAGATCGACGGCCTCGTTCTGGTAATTGGCGAGGGACAGGAAGACGCGGTGCGCGCAGCGCTCGGCGCGCGCCCCTGCCTGCCTCTCGTCACCGGCGGAGCGACCCGGCGGGACTCGGTCCGTGCTGGACTGGAGTATCTGGCCGCTCAGGGCGCGCCATCCGCCGTTCTCATCCATGATGCAGCCCGGCCTTTTGTAAGTTCTCATGTGATCTATGGTCTGCTCGCTGCCCTGCAATCGCACGAAGGTGCGTTCCCCGCCCTCCCCGTTGCCGACACGCTGGTGCGCTTTGAAGCAGTGATGGGCGACACCGTTCCGCGCGATCATCTGTACCGCGTGCAGACGCCACAAGCCTTCCTCTTCGAGGCCGTGCTGGCGGCGCACCGGTCTTGGCCCGAAGCGCGGGACGCGACCGACGACGCGCAGATGGTTCGCGATACGGGCCGAAGCGTCACGATCATTCCGGGGGATATCATGCTGGAGAAGATCACTCATCCCGAGGATTTCAGGCGGGCCGAGGCGCTGCTTGCCAGCCAGCCCATGATCAGCCGCACCGGGATGGGGTTCGACGTGCATCGGCTTGTAGCCGGCGAAGAGCTGTGGCTCTGCGGCGTTCAGATTCCCCATAGTCATGGATTGGCCGGGCACAGCGACGCGGATGTCGCCATTCACGCGTTGGTCGATGCGATCCTGGGATCGCTGGCGGAGGGCGACATCGGCAGCCATTTCCCGCCGAGCGATCCGCAATGGCGCGGTGCCCGCTCGGACCGGTTCCTCGCCTTCGCGGTCGAGCGCGTCCGCGCACGCGGCGGCCTGATCGACCATGTCGACCTGACGATCATCTGCGAAGCGCCCAAGATCGGTCCCCACAGGGACGCGATGCGCGCGCGACTGGCCGCGATCATGGAGCTCTCGCTCGATCACGTCAGCGTCAAGGCGACGACTACGGAGCGGCTGGGACTCGCCGGCCGCAAGGAAGGCATTGCCGCGCAGGCAGTCGCGACACTGCGCCTTCCTGCCACTCCTGTGGCCTGA
PROTEIN sequence
Length: 393
MADGRSNIALIVAAGSGSRVGGDVPKQFRRVGGETLLAHSVDAFAGHPEIDGLVLVIGEGQEDAVRAALGARPCLPLVTGGATRRDSVRAGLEYLAAQGAPSAVLIHDAARPFVSSHVIYGLLAALQSHEGAFPALPVADTLVRFEAVMGDTVPRDHLYRVQTPQAFLFEAVLAAHRSWPEARDATDDAQMVRDTGRSVTIIPGDIMLEKITHPEDFRRAEALLASQPMISRTGMGFDVHRLVAGEELWLCGVQIPHSHGLAGHSDADVAIHALVDAILGSLAEGDIGSHFPPSDPQWRGARSDRFLAFAVERVRARGGLIDHVDLTIICEAPKIGPHRDAMRARLAAIMELSLDHVSVKATTTERLGLAGRKEGIAAQAVATLRLPATPVA*