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cn_combo_scaffold_12502_6

Organism: CN-SCN_Sphingobium_10x

partial RP 17 / 55 BSCG 15 / 51 ASCG 2 / 38 MC: 1
Location: 4552..5121

Top 3 Functional Annotations

Value Algorithm Source
IclR family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQS3_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 84.2
  • Coverage: 190.0
  • Bit_score: 315
  • Evalue 3.40e-83
IclR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 83.7
  • Coverage: 190.0
  • Bit_score: 314
  • Evalue 2.10e-83
IclR family transcriptional regulator {ECO:0000313|EMBL:BAK65945.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sp similarity UNIPROT
DB: UniProtKB
  • Identity: 83.7
  • Coverage: 190.0
  • Bit_score: 314
  • Evalue 1.10e-82

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Taxonomy

Sphingobium sp. SYK-6 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 570
TTGATCGAGCGCAAGGTCAAGACGGTGCGGGCGCTGGAACGCGGCCTTCAGGTGCTGTCGGAGATCGACCGACGCAAGGGCGCCAATCTGCACGAACTGCACCTCGCGCTGGGCTTGCCCAAGGCGACGCTGCTGCGCATGGTGGTGACGCTGAGCAAGCACGGCCATATCTGGCAGCGGCTGGCGGACGGTGCCTTTCTGCCGAGTGTGCGGCGCGGTTTCCCGTCCCCCGATATCGAGGGCGAGGAGATTGCGGAGGTCGCTTCCGAGCATCTCGCGCGCCTGTCCGAGCAGGTCGCCTGGCCTTCCGCGCTGGCGGTGCCCCGGTCCGATCATATGGAGATCGTCGAGACCAACAGCCCGCTGCTGCGGCTGGACGCGATCACGCTGGGCCCCGTCGGCAGCCGGCTTTCCTATCTGCACACGGCGACAGGCCGCGCCTATCTCGCCGCCAGCGAGGCGGACGAGCGTGCCGTCATCCTGCGCCGTCTGCGCCCGATGGAAGCGGACGCGGCGGGCGAGCGTCTGCTCGACGATATTCTCGGCACCATCCGCGACCGGGGCTACGCC
PROTEIN sequence
Length: 190
LIERKVKTVRALERGLQVLSEIDRRKGANLHELHLALGLPKATLLRMVVTLSKHGHIWQRLADGAFLPSVRRGFPSPDIEGEEIAEVASEHLARLSEQVAWPSALAVPRSDHMEIVETNSPLLRLDAITLGPVGSRLSYLHTATGRAYLAASEADERAVILRRLRPMEADAAGERLLDDILGTIRDRGYA