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cn_combo_scaffold_12818_6

Organism: CN-SCN_Sphingobium_10x

partial RP 17 / 55 BSCG 15 / 51 ASCG 2 / 38 MC: 1
Location: comp(3543..4559)

Top 3 Functional Annotations

Value Algorithm Source
Type II secretion system protein K n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRJ1_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 76.6
  • Coverage: 338.0
  • Bit_score: 516
  • Evalue 2.30e-143
gspK; general secretion pathway protein K similarity KEGG
DB: KEGG
  • Identity: 76.6
  • Coverage: 338.0
  • Bit_score: 516
  • Evalue 6.60e-144
  • rbh
Type II secretion system protein K {ECO:0000256|PIRNR:PIRNR002786}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sph similarity UNIPROT
DB: UniProtKB
  • Identity: 76.6
  • Coverage: 338.0
  • Bit_score: 516
  • Evalue 3.30e-143

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Taxonomy

Sphingobium sp. SYK-6 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1017
ATGGCGTGTGATCGATCGTCCGAACGGGGGGCGGCGCTGCTGACCGTCCTGCTACTGGTCGCGATCCTGTCGGTCATCGCGGCGGTAGCGCTTGAGCGGCTGACCCTGGCCAGCCGGATGACGCGTAACATCGTTTCTGCCGACCAGGGGCGGGCCTATCTGCTCTCGGCCGAGCAGATGGTCGTCACGCGGATCGGCGACCTCGCGGCGCTGCGGCCCGATCGCACGACGCTGGAAGGTGGCTGGCTCGGCCAGGATCAGGCCATTCTTGTGCCGGGCGGCGCGGTGACGGCGCGGATGATCGACCGGGGGAACTGCTTCAACCTGAACAGCCTGGTGAAGGGACCGGATAACGGCCCAGGCACGGCGGAGATTCAGGATGGCACGACCTTTGTGCCGCGCCCGGAGGGAATCGCCCAGTTTGCCGGGTTGATGCGACTGCTTGGTATCGATCATGGTCAGGCCGAGCAGATTGCCATCTCGGCCGCGGACTGGATCGACAGCGATACGACGCCGGGCAATGGTGGCGCGGAAGATCAATATTATAGCGGGCTCAATCCGCCCTATCGCACGGCGAACGGGCTGATCGCGGACCCGAGCGAGCTGCTGATGGTCAGCTCCGTCACGCCAGACGTGTATCAGCGCCTGCGACCATGGATTTGCGCCCTGCCGACGCCGCAATTATCGCCGATCAACATCAATACCTTATTGCCCGGGCAGGCGGTGCTGCTCGCCATGCTTTCTCCCGAGGGATTAGGTCTGGATGCGGCGCGGCAGGTGCTGGCGCAGCGCCCGCCGGAAGGCTATGGCAGCACGGTGTCCTTCTGGAGCCTGCCCGCCATGGCGAAGCTGAGTGTGCCCGAGCCCGTGAAGGGGCAGCTGGTTCAGAAGACACGCTGGTTCGAGGCGAGCCTGCGTGCCGATCTCGGGGGAGATATGGTGGAAGAGAGTGTGCTGATCGATGCGGGAGCCAAGCCAGTGCGGCTGGTTCGCCGCCAATGGGGCGAGGGGTCGTGA
PROTEIN sequence
Length: 339
MACDRSSERGAALLTVLLLVAILSVIAAVALERLTLASRMTRNIVSADQGRAYLLSAEQMVVTRIGDLAALRPDRTTLEGGWLGQDQAILVPGGAVTARMIDRGNCFNLNSLVKGPDNGPGTAEIQDGTTFVPRPEGIAQFAGLMRLLGIDHGQAEQIAISAADWIDSDTTPGNGGAEDQYYSGLNPPYRTANGLIADPSELLMVSSVTPDVYQRLRPWICALPTPQLSPININTLLPGQAVLLAMLSPEGLGLDAARQVLAQRPPEGYGSTVSFWSLPAMAKLSVPEPVKGQLVQKTRWFEASLRADLGGDMVEESVLIDAGAKPVRLVRRQWGEGS*