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cn_combo_scaffold_14924_1

Organism: CN-SCN_Sphingobium_10x

partial RP 17 / 55 BSCG 15 / 51 ASCG 2 / 38 MC: 1
Location: 3..257

Top 3 Functional Annotations

Value Algorithm Source
Sex pilus assembly protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0HEV0_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 94.0
  • Coverage: 84.0
  • Bit_score: 163
  • Evalue 1.30e-37
Conjugal transfer protein {ECO:0000313|EMBL:KFD26743.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yan similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 84.0
  • Bit_score: 169
  • Evalue 1.90e-39
type IV secretory pathway VirB4 component similarity KEGG
DB: KEGG
  • Identity: 90.5
  • Coverage: 84.0
  • Bit_score: 152
  • Evalue 4.70e-35

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Taxonomy

Sphingobium yanoikuyae → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 255
TTGAAATCGGTCCGGAACGCCAAGCCCAATTATTCCGAGGTGTTCATCGATAGCCCTCTGGGGCTCGGCATTGCCCGCCTGGTCGTTGATCCCTTCAGCTACTGGATCAATACCTCGGCGCCCAATGAGGTGGCCGCGTTCGAAGCACTCGTGCGCGCGGGCCGCAATCCATTGGAAGCCGTTTGCGAACTGGCCGGTGTCGATCCGGTCGAGGTGCTGGGCGGTCGTGCCTATCAGGCCGGGAGGGCGGCATGA
PROTEIN sequence
Length: 85
LKSVRNAKPNYSEVFIDSPLGLGIARLVVDPFSYWINTSAPNEVAAFEALVRAGRNPLEAVCELAGVDPVEVLGGRAYQAGRAA*