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cn_combo_scaffold_30873_2

Organism: CN-SCN_Sphingobium_10x

partial RP 17 / 55 BSCG 15 / 51 ASCG 2 / 38 MC: 1
Location: 258..2726

Top 3 Functional Annotations

Value Algorithm Source
TonB-denpendent receptor n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B6C01F similarity UNIREF
DB: UNIREF100
  • Identity: 34.4
  • Coverage: 878.0
  • Bit_score: 475
  • Evalue 1.10e-130
Colicin I receptor {ECO:0000313|EMBL:AKH44325.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 60.2
  • Coverage: 829.0
  • Bit_score: 962
  • Evalue 4.20e-277
TonB-dependent receptor-like protein similarity KEGG
DB: KEGG
  • Identity: 35.5
  • Coverage: 871.0
  • Bit_score: 456
  • Evalue 2.00e-125

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Taxonomy

Altererythrobacter atlanticus → Altererythrobacter → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2469
ATGAACAAGAGCGTTGCGTTTTGGATGCCCGCGCGTGCCGTCTCCGCATGCAGTCTCACCGCGATCGCGGCGATGCTGTTGCCCGTCGCCGCGCTTCAGGCGCAGACCACAGACCCGCAGGCGGACACGACCGACGACCGGGGTGTCGGCGACATCGTGGTAACGGCGCAGTTCCGTGAGCAGAATTTGCAGGATGTGCCCATCTCCATCTCGGCGGTGAATGCCGAGCAACTCCAGCAGCGCAGCGTCGCCAACCTGACCGACGTTGCCCGCTCAGTGCCCAATGTCGAGATGCAGCAGGGCAATTCGGGTTACAGCAGCAACACTAACCAGGCCTATATCCGCGGGCTGGGGCAGGCGGACTTCCTCGCCACCTTCGAGCCGCGCGTCGGCTTCTATATCGACGACGTTTATTTCGCGACGACCTTCGGCGCGGTGTTCGATGTGCTGGATCTCGACCGGATCGAGGTGCTGCGCGGCCCGCAGGGCACGCTGTTCGGGCGCAACTCGGTGGGCGGTGCGATCCGCGTCATCTCGCGCAAGCCGCGCGGCGACAATAGCGGCTATGTGGAGGCGACCTATGGCAGCCTCAACCGCTATCAGGTGCGCGGTGCGGTCGACCTCGGGCTGGTCAAGGACGTGCTCGCCCTGCGCCTCACCGGCAGCGCGCGCGGGCAGGACGGTTGGGTCGACCTGCTTGATTACAAATGCAACAATCCCACGCTCGGCAACAATAATGTCGGCGGGCTGGGGCAGGGACCGGTCAACGATAGCTGCAAGCGCGGCACGCTGGGCGGCAGCAAGAACTATAATGTGCGCGGCTCGCTGCGCTGGCAGCCGTCCGCCACCGTGGATGTCCTGCTGCAAGGCGATTATCTCAAGGAAAATAGCGAGAGCCCGGCCGAGGGGATCATCAAGACCAGCCTCAGCCTCGACAACCCGGAGACCGGCGTGTCGGGCGGCGCGACGCGTGCCGGCTTCGATCGCACCCAGGACAACGGCCTCGCACGCTGGCTGCGCGGCCTTGGCACAAGCTATTACGGCTTCGACGTATCGACGCCAGCGCTCATGCAGCAGGTCGCCGACAGCTTCGTCTCGCCCTATCCGGCGAGCAGCTATGCTTCCTACGGCAACGCCCGCCTCGGCTACAGCAACCCGCCGGAGGGCGAGTTCAAGGCCTATGGCGCCTCGCTCAATATTGATTGGGATATTTCCGAGGCGCTGCACCTCACCTCCATTTCCGCCTATCGCAAGTCCGAGGGCGTGTTCGGCCAGAGCCTGCTGGCGGTGCCGGTGGAGGAAGTGCGCCAGTCCGTCTCCAGTCGGCAGATCAGCCAGGAAATCCGCCTGCTCGGCAACGTGCTCGATGGGATGCTCGATTTCACGCTGGGCGGCTTCTACATCAACACTAAGGGCACTAACCCCTCGCGCGTGCAGACCGAGGGCTTCACCAACGCGCTGGATTTCTATGGGGACGACCAGAACACGCTGAAAGCCTATGCGCTGTTCGGCGCGGTTGACCTGCACCCGACCGAAAAGCTCACCATCTCCGGCGGCCTGCGCTATTCGGACGAGCGCAAGACTTACCGGTTCGATCGCGATTATTCGCCATCCGGCCTCAGCGTCATCAACTTCGTGTTCGTCGGCCGCAATCACGATACGCGGGTCAATCCGCGCGTGGCGCTGGGCTATGAGGTCAATCCCGATCTCAACCTCTATGCGTCCTGGTCCACCGGCTTCACAGCCGCCGGCTTCAACGCGCGGCCGTTTGGCCCCACCTCGGTGTTCGCACTCGATCCCGAGAACGTCCAGTCGTTCGAGCTAGGCTTCAAGATGGGATTCAAGAGCCAGTTCCTCGACCGGCGGGTGCGCCTCAACGCGGCGGTCTACCAGACCGAGTTCGAGAATATCATCGGCACGACGCGCGGCGACGCCACCTCGCGCTGCCCCGGTGCGCCGTTCTGCAACGCCAATATCGGCGATGCGCGTATCAGGGGTTTTGAGGCCGAACTGCAATTGCGCCCGGTGAGTGACCTGATGCTTTCCGCGAACCTGGGCTACACCGATTTCCAATACAAAAAGCTGGTCGCCAATGTGCAGGGCCTCACGCTGGACAGCCCCAACACGCGCGTGCCCAAGTGGAACGCGAGCGGCAGCATCCAATATGATCTCAACCTTGCCAACGGCGCCCGGCTGACCCCCCGCATGGACGTGAGCTATCGTTCGCGCATCTATTATTCCACGTCGCGGGCGAACGTCTCCGCTCAGCAGGCGCCTTACGCGTTGGTCAATGCGCGGCTGACCTATGCCATGCCGGGCGACGGTTGGTCGCTCTCCATCGCGGCGACCAATTTGTTTGATAAATTCTACTATACAACCTTGACGGATCAGCGGGAAAGCTTTGGGTTCTTGAGTGGAACCATCGGGCGCCCGCGCGAGATTTTCGCGACGGTCAGGCACGAATTCTGA
PROTEIN sequence
Length: 823
MNKSVAFWMPARAVSACSLTAIAAMLLPVAALQAQTTDPQADTTDDRGVGDIVVTAQFREQNLQDVPISISAVNAEQLQQRSVANLTDVARSVPNVEMQQGNSGYSSNTNQAYIRGLGQADFLATFEPRVGFYIDDVYFATTFGAVFDVLDLDRIEVLRGPQGTLFGRNSVGGAIRVISRKPRGDNSGYVEATYGSLNRYQVRGAVDLGLVKDVLALRLTGSARGQDGWVDLLDYKCNNPTLGNNNVGGLGQGPVNDSCKRGTLGGSKNYNVRGSLRWQPSATVDVLLQGDYLKENSESPAEGIIKTSLSLDNPETGVSGGATRAGFDRTQDNGLARWLRGLGTSYYGFDVSTPALMQQVADSFVSPYPASSYASYGNARLGYSNPPEGEFKAYGASLNIDWDISEALHLTSISAYRKSEGVFGQSLLAVPVEEVRQSVSSRQISQEIRLLGNVLDGMLDFTLGGFYINTKGTNPSRVQTEGFTNALDFYGDDQNTLKAYALFGAVDLHPTEKLTISGGLRYSDERKTYRFDRDYSPSGLSVINFVFVGRNHDTRVNPRVALGYEVNPDLNLYASWSTGFTAAGFNARPFGPTSVFALDPENVQSFELGFKMGFKSQFLDRRVRLNAAVYQTEFENIIGTTRGDATSRCPGAPFCNANIGDARIRGFEAELQLRPVSDLMLSANLGYTDFQYKKLVANVQGLTLDSPNTRVPKWNASGSIQYDLNLANGARLTPRMDVSYRSRIYYSTSRANVSAQQAPYALVNARLTYAMPGDGWSLSIAATNLFDKFYYTTLTDQRESFGFLSGTIGRPREIFATVRHEF*