ggKbase home page

SR-VP_0-2_scaffold_141_2962744_16

Organism: SR-VP_0-2cm_Methanoperedens_44_27

partial RP 6 / 55 BSCG 11 / 51 ASCG 16 / 38
Location: comp(10312..11304)

Top 3 Functional Annotations

Value Algorithm Source
Probable tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01081}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.8
  • Coverage: 328.0
  • Bit_score: 540
  • Evalue 9.20e-151
Probable tRNA pseudouridine synthase B n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WMQ1_METH6 similarity UNIREF
DB: UNIREF100
  • Identity: 62.8
  • Coverage: 328.0
  • Bit_score: 430
  • Evalue 9.60e-118
putative tRNA pseudouridine synthase B similarity KEGG
DB: KEGG
  • Identity: 62.8
  • Coverage: 328.0
  • Bit_score: 430
  • Evalue 2.70e-118

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 993
ATGATGTTACCTTCAGAGAAAAAAAGAGAGAAACTTGCAAAATCCGAAGATGTGACCGACGGGAAGTACGGCAAAAAACCGGAGGTGCGACCCCTGGAAGAATATATCAGGAAAGGTGTGATTAACCTTGATAAGCCTGCAGGCCCCACAAGTCATGAAGTGACCTCATGGGTCAAGAAAATCCTGAATCTGGATAAAGCAGGGCACAGCGGCACGCTTGACCCGAACGTTACAGGGCTTCTTCCGATTATGCTTGGGGAATCGACAAGAGCGGTGGATGCGCTTCTCACGGCTGGGAAAGAATATGTCTGCCTAATGAAACTCCATACTGCAATGCCTGAAAAGACAATAAAAAGCATATTTAGCGACTTTACAGGTGAAATATTCCAGAAGCCTTCTATCAAATCTGCTGTAAAACGTGAAACCAGGTTGAGAACGATTTATTATCTTGAACTCCTTGAGATTGAGGATAATAATGTGCTCTTTAAAGTCGGCTGTGAAGCAGGGACATATATCCGTAAATTGTGCCATGACATGGGAATGGCGCTTGGCACAGGCGCGCACATGCAGGAACTCAGGCGCACAAAGAGCGGTCCTTTCAGAGAGGATGAGAAACTGGTGACGCTCCAGGACCTCAGGGATGCGTTTGTGGAGTGGCAGGAGACAGGGGATGAGGCTGAGCTGCGAAGGGTTATCAGTCCTATGGAATTTGGTTTTTCCCATCTTCCTGAAATAGTTATCCGCGATAATGCTGTGGATGCGATTTGCCACGGCGCGGGTCTAGCTGCCCCCGGCGTGCTTACGGTTGAAACGGGGATAGAAAGGGGAGACATTGTTGCTGTTTTTACGCTAAAAGGCGAAGCGGTATCATTCGGCAGGGCGCAGATGAAATCCAATGAAATATTAAGGGCTGCTACGGGTATTGTAGCAAACACAGACCGTGTGCTTATGGAAGTTGGCACTTATCCAAAAGGATGGAAAGCAAAAGCATAA
PROTEIN sequence
Length: 331
MMLPSEKKREKLAKSEDVTDGKYGKKPEVRPLEEYIRKGVINLDKPAGPTSHEVTSWVKKILNLDKAGHSGTLDPNVTGLLPIMLGESTRAVDALLTAGKEYVCLMKLHTAMPEKTIKSIFSDFTGEIFQKPSIKSAVKRETRLRTIYYLELLEIEDNNVLFKVGCEAGTYIRKLCHDMGMALGTGAHMQELRRTKSGPFREDEKLVTLQDLRDAFVEWQETGDEAELRRVISPMEFGFSHLPEIVIRDNAVDAICHGAGLAAPGVLTVETGIERGDIVAVFTLKGEAVSFGRAQMKSNEILRAATGIVANTDRVLMEVGTYPKGWKAKA*