ggKbase home page

ACD52_12_2 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
hypothetical protein similarity KEGG
DB: KEGG
51.7 999.99 1259 0.0 wwe:P147_WWE3C01G0054
hypothetical protein rbh KEGG
DB: KEGG
51.7 999.99 1259 0.0 wwe:P147_WWE3C01G0054
DNA-directed RNA polymerase subunit beta' n=1 Tax=Acidothermus cellulolyticus 11B RepID=RPOC_ACIC1 (db=UNIREF evalue=0.0 bit_score=1181.0 identity=49.56 coverage=98.6156351791531) similarity UNIREF
DB: UNIREF
49.56 98.62 1181 0.0 wwe:P147_WWE3C01G0054
coiled-coil (db=Coil db_id=coil from=712 to=740 evalue=NA) iprscan interpro
DB: Coil
null null null null wwe:P147_WWE3C01G0054
seg (db=Seg db_id=seg from=713 to=727) iprscan interpro
DB: Seg
null null null null wwe:P147_WWE3C01G0054
seg (db=Seg db_id=seg from=156 to=187) iprscan interpro
DB: Seg
null null null null wwe:P147_WWE3C01G0054
seg (db=Seg db_id=seg from=663 to=674) iprscan interpro
DB: Seg
null null null null wwe:P147_WWE3C01G0054
coiled-coil (db=Coil db_id=coil from=138 to=188 evalue=NA) iprscan interpro
DB: Coil
null null null null wwe:P147_WWE3C01G0054
beta and beta-prime subunits of DNA dependent RNA-polymerase (db=superfamily db_id=SSF64484 from=1 to=1219 evalue=0.0) iprscan interpro
DB: superfamily
null null null 0.0 wwe:P147_WWE3C01G0054
DNA-DIRECTED RNA POLYMERASE (db=HMMPanther db_id=PTHR19376 from=5 to=1218 evalue=0.0) iprscan interpro
DB: HMMPanther
null null null 0.0 wwe:P147_WWE3C01G0054
DNA-DIRECTED RNA POLYMERASE BETA CHAIN (db=HMMPanther db_id=PTHR19376:SF4 from=5 to=1218 evalue=0.0) iprscan interpro
DB: HMMPanther
null null null 0.0 wwe:P147_WWE3C01G0054
rpoC_TIGR: DNA-directed RNA polymerase, bet (db=HMMTigr db_id=TIGR02386 from=9 to=1223 evalue=0.0 interpro_id=IPR012754 interpro_description=DNA-directed RNA polymerase, subunit beta-prime GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: HMMTigr
null null null 0.0 wwe:P147_WWE3C01G0054
no description (db=HMMSmart db_id=SM00663 from=318 to=594 evalue=3.7e-141 interpro_id=IPR006592 interpro_description=RNA polymerase, N-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: HMMSmart
null null null 3.70e-141 wwe:P147_WWE3C01G0054
no description (db=Gene3D db_id=G3DSA:3.90.1120.10 from=3 to=425 evalue=9.4e-108 interpro_id=IPR007080 interpro_description=RNA polymerase Rpb1, domain 1 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: Gene3D
null null null 9.40e-108 wwe:P147_WWE3C01G0054
RNA_pol_Rpb1_1 (db=HMMPfam db_id=PF04997 from=7 to=422 evalue=5.9e-83 interpro_id=IPR007080 interpro_description=RNA polymerase Rpb1, domain 1 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: HMMPfam
null null null 5.90e-83 wwe:P147_WWE3C01G0054
RNA_pol_Rpb1_5 (db=HMMPfam db_id=PF04998 from=817 to=1181 evalue=1.4e-63 interpro_id=IPR007081 interpro_description=RNA polymerase Rpb1, domain 5 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: HMMPfam
null null null 1.40e-63 wwe:P147_WWE3C01G0054
RNA_pol_Rpb1_2 (db=HMMPfam db_id=PF00623 from=424 to=565 evalue=7.1e-44 interpro_id=IPR000722 interpro_description=RNA polymerase, alpha subunit GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: HMMPfam
null null null 7.15e-44 wwe:P147_WWE3C01G0054
no description (db=Gene3D db_id=G3DSA:2.40.40.30 from=426 to=568 evalue=5.3e-28 interpro_id=IPR000722 interpro_description=RNA polymerase, alpha subunit GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: Gene3D
null null null 5.30e-28 wwe:P147_WWE3C01G0054
RNA_pol_Rpb1_3 (db=HMMPfam db_id=PF04983 from=569 to=709 evalue=7.0e-11 interpro_id=IPR007066 interpro_description=RNA polymerase Rpb1, domain 3 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: HMMPfam
null null null 7.00e-11 wwe:P147_WWE3C01G0054
RNApol_bact_RpoC (db=HAMAP db_id=MF_01322 from=5 to=1227 evalue=9.393 interpro_id=IPR012754 interpro_description=DNA-directed RNA polymerase, subunit beta-prime GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: HAMAP
null null null 9.39e+00 wwe:P147_WWE3C01G0054
nca:Noca_0712 DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] alias=ACD52_C00012G00002,ACD52_165.6082.8G0002,ACD52_165.6082.8_2 id=74693 tax=ACD52 species=Acidothermus cellulolyticus genus=Acidothermus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria organism_group=OP11 organism_desc=OP11 similarity UNIREF
DB: UNIREF90
100.0 null 2371 0.0 wwe:P147_WWE3C01G0054
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Tax=RIFOXYC2_FULL_OP11_Curtissbacteria_41_11_curated UNIPROT
DB: UniProtKB
100.0 999.99 2371 0.0 ggdbv1_89855067