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L1_007_000G1_public_UNK

In projects: L1_007_000G1_public

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 150.41 Longest contig: 720.68 Kbp Bin length: 235.18 Mbp GC content: 46.76 %
Contigs count: 30323 Features count: 240044 rRNAs count: 34 tRNAs count: 3261

Genome completeness

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 17
Displaying items 29801-29850 of 30323 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
L1_007_000G1_scaffold_41760
Species: Subdoligranulum sp. 4_3_54A2FAA (100%)
2 1427 bp 58.16 351.51 100.49
L1_007_000G1_scaffold_29690
Species: Streptococcus sp. I-G2 (50%)
2 1018 bp 44.01 4.13 100.49
L1_007_000G1_scaffold_5071
Species: Bacteroides thetaiotaomicron CAG:40 (57.14%)
7 7326 bp 48.61 7.49 100.49
L1_007_000G1_scaffold_17509
Species: Bacteroides sp. 1_1_14 (50%)
2 1824 bp 37.01 4.77 100.49
L1_007_000G1_scaffold_11783
Species: Erysipelotrichaceae bacterium 2_2_44A (50%)
2 2812 bp 47.12 7.15 100.50
L1_007_000G1_scaffold_30107
Species: Streptococcus mitis (50%)
2 1003 bp 45.86 4.94 100.50
L1_007_000G1_scaffold_22248
Species: Anaerococcus prevotii (100%)
2 1403 bp 27.44 2.89 100.50
L1_007_000G1_scaffold_25665
Species: Streptococcus salivarius (100%)
2 1197 bp 41.60 28.32 100.50
L1_007_000G1_scaffold_25682
Species: Streptococcus salivarius (100%)
2 1197 bp 41.85 11.28 100.50
L1_007_000G1_scaffold_6609
Species: Ruminococcus sp. CAG:9 (50%)
4 5373 bp 41.43 106.00 100.50
L1_007_000G1_scaffold_25863
Species: Bilophila sp. 4_1_30 (50%)
2 1188 bp 64.81 5.30 100.51
L1_007_000G1_scaffold_8620
Order: Erysipelotrichales (60%)
5 3949 bp 50.52 6.19 100.51
L1_007_000G1_scaffold_16851
Species: Veillonella parvula (75%)
4 2755 bp 36.52 972.85 100.51
L1_007_000G1_scaffold_12906
Species: Firmicutes bacterium CAG:114 (100%)
2 2555 bp 52.92 5.11 100.51
L1_007_000G1_scaffold_23050
Species: Klebsiella pneumoniae (50%)
2 1943 bp 55.12 795.63 100.52
L1_007_000G1_scaffold_26350
Species: Staphylococcus aureus (100%)
3 1164 bp 37.89 6.70 100.52
L1_007_000G1_scaffold_26353
Species: Coprococcus comes (100%)
2 1164 bp 40.03 8.12 100.52
L1_007_000G1_scaffold_18320
Species: Odoribacter splanchnicus (50%)
2 1737 bp 44.16 4.40 100.52
L1_007_000G1_scaffold_26467
Species: Escherichia coli (100%)
3 1158 bp 58.12 3.11 100.52
L1_007_000G1_scaffold_18353
Species: Odoribacter splanchnicus (50%)
2 1734 bp 44.81 4.15 100.52
L1_007_000G1_scaffold_26768
Species: Clostridium sp. 7_3_54FAA (50%)
2 1143 bp 53.54 3.94 100.52
L1_007_000G1_scaffold_16877
Species: Veillonella parvula (50%)
2 1901 bp 42.98 214.15 100.53
L1_007_000G1_scaffold_23531
Species: Odoribacter splanchnicus (100%)
2 1319 bp 35.25 3.87 100.53
L1_007_000G1_scaffold_17063
Species: Erysipelotrichaceae bacterium 3_1_53 (50%)
2 1877 bp 47.15 3.84 100.53
L1_007_000G1_scaffold_17086
Species: Bacteroides fragilis (100%)
2 1874 bp 39.59 5.44 100.53
L1_007_000G1_scaffold_7718
Genus: Enterobacter (75%)
4 4482 bp 57.59 65.26 100.54
L1_007_000G1_scaffold_7719
Species: Enterobacter cloacae (50%)
4 4482 bp 58.34 21.92 100.54
L1_007_000G1_scaffold_12741
Genus: Streptococcus (66.67%)
3 2590 bp 33.63 79.86 100.54
L1_007_000G1_scaffold_27618
Species: Parasutterella excrementihominis CAG:233 (100%)
2 1104 bp 52.72 4.62 100.54
L1_007_000G1_scaffold_27895
Species: Erysipelotrichaceae bacterium 3_1_53 (100%)
3 1092 bp 50.18 3.57 100.55
L1_007_000G1_scaffold_19536
Species: [Clostridium] asparagiforme (100%)
2 1620 bp 37.22 5.09 100.56
L1_007_000G1_scaffold_29576
Species: Veillonella parvula (66.67%)
3 1978 bp 38.52 435.67 100.56
L1_007_000G1_scaffold_6982
Phylum: Firmicutes (66.67%)
9 5021 bp 57.74 6.30 100.56
L1_007_000G1_scaffold_11579
Species: Streptococcus mitis (100%)
5 2867 bp 44.68 5.44 100.56
L1_007_000G1_scaffold_24987
Species: Firmicutes bacterium CAG:41 (100%)
2 1235 bp 38.46 4.98 100.57
L1_007_000G1_scaffold_22228
Species: Escherichia coli CAG:4 (50%)
2 1405 bp 43.56 4.38 100.57
L1_007_000G1_scaffold_28875
Species: Finegoldia magna (100%)
2 1050 bp 29.05 3.71 100.57
L1_007_000G1_scaffold_8492
Species: Coprobacillus sp. 8_2_54BFAA (85.71%)
7 4021 bp 37.15 7.42 100.57
L1_007_000G1_scaffold_28951
Species: Clostridium perfringens (100%)
2 1047 bp 31.71 3.72 100.57
L1_007_000G1_scaffold_25270
Species: uncultured bacterium (50%)
2 1220 bp 25.66 3.93 100.57
L1_007_000G1_scaffold_25279
Species: [Clostridium] asparagiforme (66.67%)
3 1220 bp 56.48 4.18 100.57
L1_007_000G1_scaffold_29026
Species: [Clostridium] asparagiforme (100%)
2 1044 bp 57.57 4.60 100.57
L1_007_000G1_scaffold_22513
Species: Finegoldia magna (100%)
3 1384 bp 32.08 3.58 100.58
L1_007_000G1_scaffold_29185
Species: [Eubacterium] nodatum (50%)
2 1038 bp 24.18 3.90 100.58
L1_007_000G1_scaffold_29263
Species: Proteobacteria bacterium CAG:139 (50%)
2 1035 bp 44.15 4.64 100.58
L1_007_000G1_scaffold_13676
Order: Clostridiales (66.67%)
3 2392 bp 49.92 4.58 100.59
L1_007_000G1_scaffold_22820
Species: Bacteroides thetaiotaomicron CAG:40 (100%)
2 1363 bp 39.47 5.83 100.59
L1_007_000G1_scaffold_22824
Species: Clostridium sp. M62/1 (50%)
4 1363 bp 49.08 6.82 100.59
L1_007_000G1_scaffold_20558
Species: [Clostridium] innocuum (50%)
2 1530 bp 47.58 6.08 100.59
L1_007_000G1_scaffold_26168
Species: Odoribacter splanchnicus CAG:14 (50%)
2 1172 bp 47.78 4.48 100.60
Displaying items 29801-29850 of 30323 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.