ggKbase home page
This organism can only be binned in the context of its binning project GWA2. Please contact the project owner (jbanfield@berkeley.edu) to become a member and gain access.

L1_007_365G1_scaffold_1927_4

Organism: L1_007_365G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 15
Location: 1860..3134

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 424.0
  • Bit_score: 827
  • Evalue 6.40e-237
DNA polymerase IV n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5ND44_9BIFI similarity UNIREF
DB: UNIREF100
  • Identity: 98.3
  • Coverage: 424.0
  • Bit_score: 820
  • Evalue 5.50e-235
DNA polymerase IV similarity KEGG
DB: KEGG
  • Identity: 98.1
  • Coverage: 424.0
  • Bit_score: 819
  • Evalue 2.70e-235

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bifidobacterium longum → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1275
ATGAGCACCGCACCGAGACTTGAGGCCGCCAAACGCGATTGGGGCCACGACGAGACCGGATGCACCGTGCTGCATATCGACATGGATGCCTTCTATGCCTCATTGGAGGTGGCGCGCAACCCCGGGCTCAAAGGCAAGCCGGTAATCATCGGCACCGGGCCGCGCGCGGTGGTGTCCGCCGCGAGCTACGAAGCCCGGAAATACGGCATCAATTCGGCGATGCCGGCCGCGCGCGCCCATCGGTTGTGCCCGAACGGCATTTTTCTGCCAGTGGATATGGCGTATTACCGCATGATGTCGCACCGAATCATGCATGAGGTGTTTTTGACCGTTACCGACCGGTTCGAGCAGGTTTCGGTGGACGAGGGCTATATGGATGTGTCCGCCGCACTGCTGGAGTGGGGGCGGCCGAGCGCAATCGGCGCGTGGATTCGCGCTCAGGTGGCCGAGCGCTTCCACGTGACGTGTTCGGTGGGCATCGCCTGCAACAAACTGGTGGCCAAAATGGCCTCGACCAATGCCAAGCCGGACGGCATGCTGCTGATTCCGGCGGCCCGCTCGGCTGAGTTCGTGCAGATGATGCCATTGCGCGGCATTCCAGGCATCGGGCCGTCTTTGGAGAAGCGGCTTAATGCTTGGGGCGTGCATTCGGTGGCTGAATTGGCTCAGCTGGATGAAGCTGCATTGACTCGCGCCACTGGCTCCCCGGCTGCGGCACGTGGATTATGGGCGGCCTCGCACGGGTTGGATTCCCGTGAAATCACCACGGTGCGTGAGGAGAAATCCATTGGATCCGAGAAAACCTTGGCCGAGGATACGCGCGATATGCGCGTGGTATGCGGTCTGCTGCGTTCGGCCTGCGACGATGTGGCCAGCACGCTGCGACGCAAGGGACTGGTGGCGCGCACGCTGACGGTGAAGCTGCGTTTTGCTGACCTGAGCTATCAGACCCGGTCTTTTACGATGGAGCGGCCGACCGATACGGCCGGCGTGCTGTACCCCGAATGCGTGCGGCAGCTGAAAGTCATGTTGGGGCTGCCAGCCTCGGCGGAGTCTGCCACTCCCCTGCCCAAAACTATTCGCTTGGCCGGTATGAGCACGTCTTCGCTCAGTGAGGCGGCGGCTACGGCCGTGCAGCCTTCACTGGATGACATGCTCGAAGAGGCCTACAATGCTCGCGGCCAGACCTCACAGGCACGCTTGCATGATGCCGAGGCCGCGCTGGATGCCGTACGCCGCAAATTCGGCTGCAAGGCCGCCCGGTTTGGGGCGTGA
PROTEIN sequence
Length: 425
MSTAPRLEAAKRDWGHDETGCTVLHIDMDAFYASLEVARNPGLKGKPVIIGTGPRAVVSAASYEARKYGINSAMPAARAHRLCPNGIFLPVDMAYYRMMSHRIMHEVFLTVTDRFEQVSVDEGYMDVSAALLEWGRPSAIGAWIRAQVAERFHVTCSVGIACNKLVAKMASTNAKPDGMLLIPAARSAEFVQMMPLRGIPGIGPSLEKRLNAWGVHSVAELAQLDEAALTRATGSPAAARGLWAASHGLDSREITTVREEKSIGSEKTLAEDTRDMRVVCGLLRSACDDVASTLRRKGLVARTLTVKLRFADLSYQTRSFTMERPTDTAGVLYPECVRQLKVMLGLPASAESATPLPKTIRLAGMSTSSLSEAAATAVQPSLDDMLEEAYNARGQTSQARLHDAEAALDAVRRKFGCKAARFGA*