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L1_007_365G1_scaffold_14855_2

Organism: L1_007_365G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 15
Location: 589..1215

Top 3 Functional Annotations

Value Algorithm Source
RNase E specificity factor CsrD n=4 Tax=Escherichia coli RepID=U7CA51_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 98.6
  • Coverage: 209.0
  • Bit_score: 408
  • Evalue 2.50e-111
csrD; Regulator of CsrB and CsrC decay CsrD similarity KEGG
DB: KEGG
  • Identity: 98.6
  • Coverage: 209.0
  • Bit_score: 408
  • Evalue 7.00e-112
Regulatory protein CsrD {ECO:0000313|EMBL:EYZ96606.1}; TaxID=1446551 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O119:H4 str. 03-3458.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.6
  • Coverage: 209.0
  • Bit_score: 408
  • Evalue 3.50e-111

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 627
ATGAGATTAACGACGAAATCTTCGGCCTTTGTCACGCTGCTCACCGGGTTAACAATTTTTGTGACTTTGCTGGGCTGTTCGCTAAGTTTCTACAACGCCATTCAGTATAAGTTTAGTCATCGTGTTCAGGCGGTGGCGACGGCGATTGATACCCACCTAGTGTCGAATGACTTCAGCAAATTAAGGCCACAAATTACCGAATTAATGATGTCGGCAGATATCGTTCGTATAGACCTGCTCCATGGTGATAAGCAGGTTTATACCCTGGCCAGAAATGGTAGTTATCGTCCGGTTGGCACCAACGATCTGTTTCGTGAACTGAGCGTTCCGTTGATAAAGCATCCGGGGATGTCGCTGCGTCTGGTTTATCAGGATCCGATGGGCAACTATTTCCATTCTTTAATGACTACCGCGCCGCTCACGGGGGCGATTGGCTTTATCATTCTTATGCTCTTCCTGGCGGTACGCTGGTTACAACGGCAACTTGCCGGGCAAGAATTGCTGGAAACCCGGGCTACTCGTATCTTAAACGGTGAGCGTGGCTCTAATGTGTTGGGAACCATCTATGAATGGCCGCCCAGAACCAGCAGTGCGCTGGATACGCTGCTTTGTGAAATTCAGAACGCA
PROTEIN sequence
Length: 209
MRLTTKSSAFVTLLTGLTIFVTLLGCSLSFYNAIQYKFSHRVQAVATAIDTHLVSNDFSKLRPQITELMMSADIVRIDLLHGDKQVYTLARNGSYRPVGTNDLFRELSVPLIKHPGMSLRLVYQDPMGNYFHSLMTTAPLTGAIGFIILMLFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLCEIQNA