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L1_008_000M1_scaffold_45_109

Organism: L1_008_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 16
Location: comp(132114..133640)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=2 Tax=Bifidobacterium bifidum RepID=E4NXN7_BIFBP similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 506.0
  • Bit_score: 993
  • Evalue 5.70e-287
RNA polymerase principal sigma factor HrdB similarity KEGG
DB: KEGG
  • Identity: 99.8
  • Coverage: 506.0
  • Bit_score: 993
  • Evalue 1.60e-287
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 506.0
  • Bit_score: 993
  • Evalue 8.00e-287

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Taxonomy

Bifidobacterium bifidum → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1527
ATGAGTTTGGCCACGAAGGATACGATGGCGACGACAGTCCCGGACGATACGGACGCCAAGACGAAATCCGAGAAGAAGGGAACCGCCGCGCGTACGGCCTCTACGGCAGACAAGAAGACCGCCGCGGGCAGGAAGTCCGCCGCGGGCAAGAAGACCTCGTCGAGGTCCGCCGCGTCCAAGTCCACGGCACGCAAGTCCTCGGCGAAGGCAGCCGCGCCCGCGAAGCCCACCCGCAAGCGCGCCGCGTCCAAGTCGGCGAAGGCCGTCAAGGACGAGACCGAGGAGATGGCGAAGACCGAGGAACTCGCCAACGAGGATTCCTCGGACGATCTCGACGACGTCCAGGTCGATGAGGATGGTCTGGGGAACCTTGACGACGATCTCGACGATGTCGATGACGGCGGTCTGGATGGCGATGATGATGACATCGATGACGAATCCGGTGAGGATGACGACGTTCCCGAGGACGAAGAGGACGACGAGGGGACCGAACCCGGGCGCAAGGAGCCTGAACAGCCCAAGGAGAAGGGCGCGTTCGTGGTGCGCGACGATGACGACGACGAGAACCTGACCCCGTCGGGCAATCCGAAGCGTCGCGTCATCGCTGCGGGCGCCACAGCGGATCCGGTCAAGGACTATCTCAAGCAGATTGGCCGTGTCAGCCTGCTGAACGCCGAGCAGGAGGTGGACCTCTCCGAGCGCATCGAGGCCGGCCTGTACGCCCAGCACCTGCTCGATACCGAGAGCGACGGCATGGACTTCAAGCGCAAGCGCGAGCTCAAGTGGGCGGCGAACGATGGCAAGAAGGCCAAGGACCACCTGCTGGAGGCGAACCTGCGACTCGTGGTGTCGCTGGCCAAGCGCTACACCGGCCGTGGCATGCTCTTCCTTGACCTGATCCAGGAAGGCAACCTGGGCCTCATCCGAGCCGTCGAGAAGTTCGACTGGAAGAAGGGCTTCAAGTTCTCCACCTATGCCACGTGGTGGATCCGTCAGGCCATCACCCGCGCCATGGCCGATCAGGCACGCACCATCCGCGTGCCCGTGCACATGGTCGAGGTCATCAACAAGCTGTCGCGCGTTCAGCGCCAGATGCTGCAGGATCTGGGCCGCGAGCCCACGCCGGACGAGCTGGCCCGCGAGCTCGACATGCCGGTCGAGAAGGTGCAGGAGGTGCAGAAGTACGGCCGCGAGCCGATCTCGCTGCACACGCCGCTGGGCGAGGACGGCGATTCCGAGTTCGGCGACCTCATCGAGGACACCGACGCCATCGCGCCGTCCGACGCGGTCGCGTTCTCGCTGCTGCAGGAGCAGTTCAAGCAGGTGCTGGAGACTCTGAGCCCCCGCGAGGCCGGCGTCATCAAGATGCGTTACGGTTTGGAGGACGGCCAGCCCAAGACGCTGGACGATATCGGCCGCGTGTACGGCGTGACCCGTGAGCGTATCCGCCAGATAGAGTCCAAGACGATGTCGAAGCTGCGCCACCCGTCGCGCTCCCAGACCCTGCGCGACTTCCTTGATCAGTGA
PROTEIN sequence
Length: 509
MSLATKDTMATTVPDDTDAKTKSEKKGTAARTASTADKKTAAGRKSAAGKKTSSRSAASKSTARKSSAKAAAPAKPTRKRAASKSAKAVKDETEEMAKTEELANEDSSDDLDDVQVDEDGLGNLDDDLDDVDDGGLDGDDDDIDDESGEDDDVPEDEEDDEGTEPGRKEPEQPKEKGAFVVRDDDDDENLTPSGNPKRRVIAAGATADPVKDYLKQIGRVSLLNAEQEVDLSERIEAGLYAQHLLDTESDGMDFKRKRELKWAANDGKKAKDHLLEANLRLVVSLAKRYTGRGMLFLDLIQEGNLGLIRAVEKFDWKKGFKFSTYATWWIRQAITRAMADQARTIRVPVHMVEVINKLSRVQRQMLQDLGREPTPDELARELDMPVEKVQEVQKYGREPISLHTPLGEDGDSEFGDLIEDTDAIAPSDAVAFSLLQEQFKQVLETLSPREAGVIKMRYGLEDGQPKTLDDIGRVYGVTRERIRQIESKTMSKLRHPSRSQTLRDFLDQ*