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L1_008_000M1_scaffold_25024_1

Organism: L1_008_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 16
Location: 3..1889

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.7
  • Coverage: 629.0
  • Bit_score: 1116
  • Evalue 0.0
rpoC; DNA-directed RNA polymerase beta' subunit (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 72.0
  • Coverage: 651.0
  • Bit_score: 898
  • Evalue 6.70e-259
DNA-directed RNA polymerase subunit beta' n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RXL0_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 89.7
  • Coverage: 629.0
  • Bit_score: 1116
  • Evalue 0.0

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Taxonomy

Firmicutes bacterium CAG:129 → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1887
CCGGACGGCACCATGGGCAGCAAGGTCGTGCGCGTTACCATCGGCCGCATCATCTTCAACCGCAACATCCCGCAGGACCTTGGCTTTGTCAAGCGCGTGGATGAAAACGGCGAGCCGACCGAAAACTACTTCGACTACGAGATCACCGAGGTCTGCGGCAAGAAGTTGCTCGGCAAGATCGTCGACCGTACGATCAAGCTGCACAACTTCACCATCGCGGCCGAAGTGCTCGATAACATCAAGGCCACGGGCTACAAGTTCTCCACCCGTGCGGCCATCAGCATCTCCGTTGCGGATATGACCATTCCGCCGGCAAAGTACACCCTCATTGCCGAGACCGAGCAGCGCGTCGTCGACATTGAAGACCAGTTCAAGATGGGCTTCATGACCGAGGACGAGCGCTACCGCGCTGTCGTCAAGGAGTGGGAAAAGACCACCGCGGACGTCACCGACGCCCTGCAGAAGAACATGGACCGCTACAACCCCATCTTCATGATGGCGGACTCCGGCGCCCGTGGTTCGATGAAGCAGATCCGTCAGCTGACCGGTATGCGCGGCCTGATGGCCAACACCGCCGGTAAGACGATCGAGATCCCGGTCAAGGCAAACTTCCGCGAAGGTCTGTCCGTCCTTGAATACTTCACCTCCTCCCGAGGCGCCCGTAAGGGCCTTGCCGATACGGCTCTTCGTACGGCAGACTCCGGTTACCTGACCCGCCGAATGGTCGACGTCTGCCAGGATGTCATCATCCGCTCCGACGACTGCGGCGCGACCCGCGGCATCACGATCAGCGAGATCAGCGAGAACGGCCAGGTCATCGAAAAGTTCTCCGAGCGCGTCAACGGCCGCTATCCGGTCTACGACGTGATGAAGCCCGGCACGGACGAGGTCCTCATTTCCAAGGATCACATGATGACCCCCGAGGATGCCGACCTCATGGAGAAGTTCGATATCCACTCCGTCGAGATCCGCACGGTGCTTACGTGCAAGGCCCACAGCGGCGTTTGCGCGAAGTGCTACGGCATGAACCTTGCCACGAGCAAGCCCGTCGGCCCCGGCGAGGCGGTCGGTATCATCGCGGCCCAGTCCATCGGCGAGCCCGGTACGCAGCTGACGATGCGAACCTTCCACACCGGCGGCGTTGCGGGCGGCGATATCACCCAGGGTCTTCCGCGAGTCGAGGAACTGTTTGAGGCGCGCCGTCCCAAGAAGATGGCGACCCTCGCCGAGATCGGCGGTAAGGTCCGCTTCGAAGAGGCGACCAAGGGCAGCCTGCTCAACATCATCGTCACCGCGGACGACGGCGACAACCGCATCTACTCGGTGCCGCACACCGGCCTTCGCGTGAACGACGGCGACGTCATCGCCAAGGGCACGCAGCTGCAGGACGGCGCGCTGTCCCCGCACGATATCCTGCGTATCCGCGGCACGTCCGCCGTTCATGACTACCTCATTCAGGAAGTTTTGAAGGTTTACCGTCAGCAGGGCGTTGACATCAACGATAAGCATATCGAGGTCATCGTCCGCCAGATGATGCGCAAGGTGCGCGTCGAGGAGTCCGGCGATACGAACCTGCTCTCCGGCTCCATGGTCGATCTGCTTGAGTATGAGGATGCCAACGAGGAGATCCGCGCGCGCAATGCCGCGGGCGAGGTCAACGCCGAGACCGGCGAGCCGCTGCAGGAAGCCATTGCCACGCAGCTGCTCATGGGTATCACGAAGGCCTCTCTTGCGACCGACAGCTGGATGTCCGCCGCGTCCTTCCAGGAGACCACAAAGGTCCTGACTGAAGCCGCCATCAAGGGTAAGGTCGACCACCTTGTTGGTCTGAAGGAGAACGTCATCATCGGTAAGCTCATCCCCGCCGGTGCAGGCCTGAACGCCTAC
PROTEIN sequence
Length: 629
PDGTMGSKVVRVTIGRIIFNRNIPQDLGFVKRVDENGEPTENYFDYEITEVCGKKLLGKIVDRTIKLHNFTIAAEVLDNIKATGYKFSTRAAISISVADMTIPPAKYTLIAETEQRVVDIEDQFKMGFMTEDERYRAVVKEWEKTTADVTDALQKNMDRYNPIFMMADSGARGSMKQIRQLTGMRGLMANTAGKTIEIPVKANFREGLSVLEYFTSSRGARKGLADTALRTADSGYLTRRMVDVCQDVIIRSDDCGATRGITISEISENGQVIEKFSERVNGRYPVYDVMKPGTDEVLISKDHMMTPEDADLMEKFDIHSVEIRTVLTCKAHSGVCAKCYGMNLATSKPVGPGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGGDITQGLPRVEELFEARRPKKMATLAEIGGKVRFEEATKGSLLNIIVTADDGDNRIYSVPHTGLRVNDGDVIAKGTQLQDGALSPHDILRIRGTSAVHDYLIQEVLKVYRQQGVDINDKHIEVIVRQMMRKVRVEESGDTNLLSGSMVDLLEYEDANEEIRARNAAGEVNAETGEPLQEAIATQLLMGITKASLATDSWMSAASFQETTKVLTEAAIKGKVDHLVGLKENVIIGKLIPAGAGLNAY