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L1_008_000M1_scaffold_35343_1

Organism: L1_008_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 16
Location: comp(3..860)

Top 3 Functional Annotations

Value Algorithm Source
Predicted protein (Fragment) n=1 Tax=Hordeum vulgare var. distichum RepID=F2E5I5_HORVD similarity UNIREF
DB: UNIREF100
  • Identity: 34.5
  • Coverage: 249.0
  • Bit_score: 127
  • Evalue 2.00e-26
Predicted protein {ECO:0000313|EMBL:BAK02607.1}; Flags: Fragment;; TaxID=112509 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum.;" source="Hordeum vulgare var. distichum (Domesticated barley).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.5
  • Coverage: 249.0
  • Bit_score: 127
  • Evalue 2.80e-26
Na-Ca exchanger/integrin-beta4 similarity KEGG
DB: KEGG
  • Identity: 32.5
  • Coverage: 252.0
  • Bit_score: 115
  • Evalue 2.20e-23

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Taxonomy

Hordeum vulgare → Hordeum → Poales → commelinids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 858
ATGCCGGACGATACGCCGCCGCCTGCTCCTGAACCTGCGCCGCAGCCGGAGGCCCCCACCGAAGCGAAACCGGAGCCTCCCGCCGAACCACAGTCACCTGAACCGGAAAATCCGCAGGAGTCCCCGGAAGCGATTGGCGCAAAGCTGCTCCATCTGGCCTTTGGCATTACGGCTGCCGCCGCGGAAGAGCAGCTGTCACCCGCACCACAGGAGGCGTCGGACCCTCCCGCTGCGGAGGAACCGGAAAATGCCGGGTCGCCTGCCGCTGACCCGCCTCCGCCGCATGAGCCGCCCGCTGAAAACCCGCCTGCCGATCCTATTGACAAACCTGTGCAGGATGAGCCGGCCGCCGAAACCCCGCCGGCCGATCCCACCGCCGAGCCTGCGCAGGAACCACCGCCCGCCGAAAATCCGCCGGCTGACCCAACCCAAGAACCCCCGCAGGAATCACCTGTGGTTCCAGCTGAAACGCCCGGCGCATCCTCTCAGCCGCCCGCAGGGGCCACGACGGAACCGCTTCCTGCCGCCACGGAAACGCCTTCTGCGCCGCTAACGGAGCCCTCCCCAAGCCCCTGCGCAACCCAGCAGCCGACGCCGGAACCCCGCATCCGCCCGGAGAGCATTCCGGCGCAGCCCATCAGCCAAATGCGCAGCGCAAACGGCGGCGCAAGCTCCGTGGCGTTCCCCGGCCTGTTTGACGAAGTGACGGACGTCCATCTGACGGCCTTTACCACGGGCTTTAAGGAGGATATCGTCGTAGGCGCCTTCACGGGCAACCATGTCTATGCCTATGAATTGCATACCAGCGGCCTGACCGCCTCCCTCAGCGGACAGGAGATTTTGCTCAGCGACGCCCAG
PROTEIN sequence
Length: 286
MPDDTPPPAPEPAPQPEAPTEAKPEPPAEPQSPEPENPQESPEAIGAKLLHLAFGITAAAAEEQLSPAPQEASDPPAAEEPENAGSPAADPPPPHEPPAENPPADPIDKPVQDEPAAETPPADPTAEPAQEPPPAENPPADPTQEPPQESPVVPAETPGASSQPPAGATTEPLPAATETPSAPLTEPSPSPCATQQPTPEPRIRPESIPAQPISQMRSANGGASSVAFPGLFDEVTDVHLTAFTTGFKEDIVVGAFTGNHVYAYELHTSGLTASLSGQEILLSDAQ