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L2_013_245G1_public_UNK

In projects: L2_013_245G1_public

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 57.95 Longest contig: 538.61 Kbp Bin length: 89.30 Mbp GC content: 48.07 %
Contigs count: 19835 Features count: 98731 rRNAs count: 18 tRNAs count: 1481

Genome completeness

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 16
Displaying items 19401-19450 of 19835 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
L2_013_245G1_scaffold_16490
Species: Olsenella profusa (50%)
2 1153 bp 29.14 6.24 100.69
L2_013_245G1_scaffold_14244
Order: Clostridiales (50%)
4 1287 bp 58.43 3.50 100.70
L2_013_245G1_scaffold_5648
Species: Roseburia hominis (50%)
2 2687 bp 56.38 7.70 100.71
L2_013_245G1_scaffold_7465
Genus: Clostridium (66.67%)
3 2118 bp 40.89 7.01 100.71
L2_013_245G1_scaffold_16913
Species: Dorea formicigenerans (50%)
2 1129 bp 31.98 6.24 100.71
L2_013_245G1_scaffold_8168
Species: Erysipelotrichaceae bacterium 5_2_54FAA (100%)
2 1972 bp 33.57 5.17 100.71
L2_013_245G1_scaffold_17148
Species: Peptoclostridium difficile (50%)
2 1117 bp 35.54 5.37 100.72
L2_013_245G1_scaffold_11340
Species: Clostridiales bacterium 1_7_47FAA (100%)
3 1528 bp 50.98 5.10 100.72
L2_013_245G1_scaffold_10237
Species: Firmicutes bacterium CAG:822 (50%)
2 1656 bp 32.97 4.71 100.73
L2_013_245G1_scaffold_1712
Order: Clostridiales (50%)
10 8944 bp 61.48 9.78 100.73
L2_013_245G1_scaffold_6259
Species: Clostridiales bacterium 1_7_47FAA (100%)
4 2463 bp 54.00 5.42 100.73
L2_013_245G1_scaffold_15183
Species: Haemophilus parainfluenzae (66.67%)
3 1227 bp 36.27 5.01 100.73
L2_013_245G1_scaffold_17769
Species: Tyzzerella nexilis (50%)
2 1087 bp 37.81 8.14 100.74
L2_013_245G1_scaffold_15380
Species: Lachnospiraceae bacterium 3_1_57FAA_CT1 (100%)
2 1215 bp 57.61 3.83 100.74
L2_013_245G1_scaffold_15425
Species: Coprococcus eutactus (50%)
2 1212 bp 59.65 8.29 100.74
L2_013_245G1_scaffold_15569
Species: Lachnospiraceae bacterium CAG:364 (50%)
2 1203 bp 38.90 4.86 100.75
L2_013_245G1_scaffold_18180
Species: Clostridium sp. FS41 (50%)
2 1069 bp 56.59 4.91 100.75
L2_013_245G1_scaffold_18259
Species: human gut metagenome (50%)
2 1066 bp 34.05 4.22 100.75
L2_013_245G1_scaffold_7488
Genus: Erysipelatoclostridium (50%)
4 2114 bp 32.02 5.46 100.76
L2_013_245G1_scaffold_7517
Species: Anaerostipes sp. CAG:276 (66.67%)
3 2108 bp 47.01 6.19 100.76
L2_013_245G1_scaffold_18558
Species: Butyrivibrio fibrisolvens (50%)
2 1054 bp 46.20 2.85 100.76
L2_013_245G1_scaffold_13954
Species: Clostridium sp. ASF356 (50%)
2 1307 bp 38.18 4.13 100.76
L2_013_245G1_scaffold_16078
Species: Clostridium sp. ASF356 (50%)
2 1176 bp 45.75 3.57 100.76
L2_013_245G1_scaffold_9916
Species: Phascolarctobacterium succinatutens (50%)
2 1694 bp 38.31 6.91 100.77
L2_013_245G1_scaffold_18898
Species: Clostridiales bacterium 1_7_47FAA (100%)
2 1039 bp 52.84 3.46 100.77
L2_013_245G1_scaffold_18991
Species: Pseudoflavonifractor capillosus (50%)
2 1036 bp 55.60 3.47 100.77
L2_013_245G1_scaffold_5890
Species: Coprococcus comes CAG:19 (66.67%)
3 2587 bp 49.59 5.04 100.77
L2_013_245G1_scaffold_9170
Species: Clostridium sp. MSTE9 (66.67%)
3 1798 bp 54.06 4.67 100.78
L2_013_245G1_scaffold_14456
Species: Anaerostipes caccae (100%)
2 1274 bp 44.74 7.18 100.79
L2_013_245G1_scaffold_8499
Species: Veillonella sp. oral taxon 158 (100%)
3 1908 bp 38.21 6.21 100.79
L2_013_245G1_scaffold_16720
Species: Lachnospiraceae bacterium CAG:364 (100%)
2 1140 bp 40.26 3.16 100.79
L2_013_245G1_scaffold_14712
Species: Erysipelotrichaceae bacterium 5_2_54FAA (100%)
2 1256 bp 37.50 4.90 100.80
L2_013_245G1_scaffold_12973
Species: Firmicutes bacterium CAG:424 (100%)
2 1381 bp 44.82 3.26 100.80
L2_013_245G1_scaffold_14754
Species: Lachnospiraceae bacterium 3_1_57FAA_CT1 (50%)
2 1253 bp 53.63 3.35 100.80
L2_013_245G1_scaffold_11727
Species: Bacillus weihenstephanensis (100%)
2 1488 bp 37.70 4.64 100.81
L2_013_245G1_scaffold_14989
Species: Pseudoflavonifractor capillosus (100%)
3 1238 bp 56.46 9.94 100.81
L2_013_245G1_scaffold_12517
Order: Clostridiales (66.67%)
3 2348 bp 58.65 3.71 100.81
L2_013_245G1_scaffold_9668
Species: Clostridiales bacterium 1_7_47FAA (100%)
3 1726 bp 54.98 4.95 100.81
L2_013_245G1_scaffold_8853
Species: Cellulosilyticum lentocellum (66.67%)
3 1848 bp 46.54 4.87 100.81
L2_013_245G1_scaffold_8900
Order: Clostridiales (66.67%)
3 1842 bp 39.79 4.48 100.81
L2_013_245G1_scaffold_17461
Species: Blautia hansenii (50%)
2 1101 bp 39.42 3.54 100.82
L2_013_245G1_scaffold_15233
Species: Lachnospiraceae bacterium 2_1_58FAA (100%)
2 1223 bp 42.19 40.47 100.82
L2_013_245G1_scaffold_15242
Species: Lachnospiraceae bacterium 2_1_58FAA (100%)
2 1223 bp 41.78 42.19 100.82
L2_013_245G1_scaffold_17597
Species: Firmicutes bacterium CAG:424 (100%)
2 1095 bp 42.01 4.11 100.82
L2_013_245G1_scaffold_9026
Species: Veillonella sp. oral taxon 158 (100%)
4 1818 bp 36.96 6.35 100.83
L2_013_245G1_scaffold_6824
Species: Clostridiales bacterium 1_7_47FAA (100%)
2 2285 bp 54.40 4.20 100.83
L2_013_245G1_scaffold_9157
Order: Clostridiales (66.67%)
3 1800 bp 53.89 8.50 100.83
L2_013_245G1_scaffold_18005
Species: Clostridium sp. CAG:7 (50%)
2 1077 bp 55.15 4.04 100.84
L2_013_245G1_scaffold_15808
Species: Clostridiales bacterium 1_7_47FAA (100%)
2 1190 bp 52.86 4.29 100.84
L2_013_245G1_scaffold_12595
Species: Clostridium sp. ASF356 (50%)
2 1413 bp 40.84 4.46 100.85
Displaying items 19401-19450 of 19835 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.