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L2_022_000M1_public_UNK

In projects: L2_022_000M1_public

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 51.98 Longest contig: 506.74 Kbp Bin length: 82.39 Mbp GC content: 46.80 %
Contigs count: 13677 Features count: 81750 rRNAs count: 15 tRNAs count: 1007

Genome completeness

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 15
Displaying items 301-350 of 13677 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
L2_022_000M1_scaffold_12157
Species: Eubacterium sp. CAG:274 (50%)
2 1083 bp 45.15 3.60 100.55
L2_022_000M1_scaffold_12047
Species: Faecalibacterium sp. CAG:82 (50%)
2 1089 bp 66.67 5.23 100.55
L2_022_000M1_scaffold_12009
Species: [Ruminococcus] torques (50%)
2 1092 bp 39.56 4.26 100.55
L2_022_000M1_scaffold_9649
Species: Blautia sp. KLE 1732 (100%)
2 1277 bp 44.32 11.39 100.55
L2_022_000M1_scaffold_7972
Species: Lachnospiraceae bacterium 3-2 (100%)
2 1462 bp 41.52 4.31 100.55
L2_022_000M1_scaffold_5778
Species: Lachnospiraceae bacterium CAG:25 (66.67%)
3 1850 bp 35.73 3.08 100.54
L2_022_000M1_scaffold_5086
Species: Coprococcus catus (50%)
2 2041 bp 46.74 23.66 100.54
L2_022_000M1_scaffold_3264
Order: Clostridiales (100%)
3 2972 bp 49.43 74.75 100.54
L2_022_000M1_scaffold_11640
Species: Roseburia hominis (50%)
2 1116 bp 40.68 3.49 100.54
L2_022_000M1_scaffold_1707
Species: butyrate-producing bacterium SS3/4 (100%)
6 6144 bp 49.10 6.23 100.54
L2_022_000M1_scaffold_11597
Species: Subdoligranulum variabile (100%)
2 1119 bp 64.97 4.56 100.54
L2_022_000M1_scaffold_9203
Species: Blautia obeum (50%)
2 1322 bp 43.80 5.79 100.53
L2_022_000M1_scaffold_11112
Species: Anaerotruncus sp. G3(2012) (50%)
2 1152 bp 49.83 3.39 100.52
L2_022_000M1_scaffold_5480
Species: [Clostridium] symbiosum (50%)
6 1931 bp 40.60 15.46 100.52
L2_022_000M1_scaffold_4846
Species: [Clostridium] saccharolyticum (50%)
2 2125 bp 38.12 7.20 100.52
L2_022_000M1_scaffold_5452
Species: Bacteroides ovatus (75%)
4 1937 bp 48.12 3.56 100.52
L2_022_000M1_scaffold_8753
Species: Lachnospiraceae bacterium 8_1_57FAA (50%)
2 1367 bp 46.09 7.46 100.51
L2_022_000M1_scaffold_10527
Species: Parabacteroides johnsonii (100%)
2 1197 bp 37.68 19.42 100.50
L2_022_000M1_scaffold_10535 3 1197 bp 65.00 4.14 100.50
L2_022_000M1_scaffold_4683
Order: Clostridiales (100%)
3 2200 bp 60.50 4.36 100.50
L2_022_000M1_scaffold_4670
Species: Eubacterium plexicaudatum (50%)
4 2206 bp 59.93 5.58 100.50
L2_022_000M1_scaffold_3454
Species: Ruminococcus obeum CAG:39 (50%)
2 2818 bp 42.09 5.32 100.50
L2_022_000M1_scaffold_13446
Species: Pelosinus fermentans (100%)
2 1009 bp 42.42 3.87 100.50
L2_022_000M1_scaffold_10223
Species: Ruminococcus torques CAG:61 (50%)
2 1224 bp 52.37 6.13 100.49
L2_022_000M1_scaffold_2665
Species: Bacteroides sp. D2 (50%)
4 5347 bp 40.73 128.93 100.49
L2_022_000M1_scaffold_10062
Species: Parabacteroides johnsonii (100%)
2 1239 bp 37.93 19.25 100.48
L2_022_000M1_scaffold_8049
Species: Lachnospiraceae bacterium 28-4 (50%)
2 1451 bp 58.44 4.34 100.48
L2_022_000M1_scaffold_9771
Species: Lachnospiraceae bacterium 7_1_58FAA (100%)
2 1263 bp 37.45 19.12 100.48
L2_022_000M1_scaffold_9778
Species: Dialister sp. CAG:486 (50%)
2 1263 bp 49.01 3.56 100.48
L2_022_000M1_scaffold_12496
Species: Lachnospiraceae bacterium 3_1_46FAA (50%)
2 1063 bp 41.96 8.04 100.47
L2_022_000M1_scaffold_2634
Species: Blautia sp. CAG:37 (100%)
2 3625 bp 51.67 6.37 100.47
L2_022_000M1_scaffold_9566
Species: Lachnospiraceae bacterium 8_1_57FAA (100%)
2 1284 bp 40.97 8.76 100.47
L2_022_000M1_scaffold_9236
Species: Dorea longicatena (50%)
2 1317 bp 45.79 4.10 100.46
L2_022_000M1_scaffold_11728
Species: Blautia obeum (100%)
2 1111 bp 43.74 3.78 100.45
L2_022_000M1_scaffold_11672
Species: Dialister invisus CAG:218 (100%)
2 1114 bp 49.19 5.39 100.45
L2_022_000M1_scaffold_3681
Species: Bacteroides xylanisolvens (100%)
3 3130 bp 46.96 4.84 100.45
L2_022_000M1_scaffold_11568
Genus: Bilophila (66.67%)
3 1120 bp 63.39 5.63 100.45
L2_022_000M1_scaffold_11323
Species: Ruminococcus sp. SR1/5 (50%)
2 1138 bp 44.90 3.56 100.44
L2_022_000M1_scaffold_3972
Species: Lachnospiraceae bacterium 3_1_46FAA (66.67%)
3 2506 bp 48.04 6.88 100.44
L2_022_000M1_scaffold_8684
Species: Clostridium sp. CAG:7 (50%)
2 1374 bp 44.32 5.68 100.44
L2_022_000M1_scaffold_11044
Species: Bifidobacterium bifidum (50%)
2 1156 bp 68.08 2.85 100.43
L2_022_000M1_scaffold_10970
Species: Sutterella sp. CAG:521 (50%)
2 1162 bp 37.87 5.81 100.43
L2_022_000M1_scaffold_6585
Species: Lachnospiraceae bacterium 8_1_57FAA (50%)
2 1670 bp 43.17 4.49 100.42
L2_022_000M1_scaffold_10520
Species: Lachnospiraceae bacterium 8_1_57FAA (100%)
2 1198 bp 41.40 4.51 100.42
L2_022_000M1_scaffold_6269
Species: RBG_13_Pacearchaeota_36_9_curated (50%)
2 1733 bp 40.16 4.24 100.40
L2_022_000M1_scaffold_9656
Species: Blautia sp. CAG:37 (100%)
2 1276 bp 44.83 4.47 100.39
L2_022_000M1_scaffold_13109
Species: Lachnospiraceae bacterium 8_1_57FAA (50%)
2 1028 bp 46.50 6.57 100.39
L2_022_000M1_scaffold_12998
Species: Dialister invisus (66.67%)
3 1034 bp 37.81 2.76 100.39
L2_022_000M1_scaffold_12832
Species: Coprococcus catus (50%)
2 1043 bp 38.64 5.18 100.38
L2_022_000M1_scaffold_12790
Species: Faecalibacterium prausnitzii (100%)
2 1046 bp 65.11 4.02 100.38
Displaying items 301-350 of 13677 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.