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L2_022_103G1_scaffold_6061_2

Organism: L2_022_103G1_public_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: 216..929

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EEL6_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 75.1
  • Coverage: 213.0
  • Bit_score: 325
  • Evalue 3.10e-86
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.1
  • Coverage: 213.0
  • Bit_score: 325
  • Evalue 4.40e-86
sigE; RNA polymerase sigma factor, sigma-E factor similarity KEGG
DB: KEGG
  • Identity: 66.4
  • Coverage: 238.0
  • Bit_score: 311
  • Evalue 1.30e-82

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Taxonomy

[Clostridium] methylpentosum → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 714
ATGCAGATATTCCAAACAATTTATAAAAAGATAGACCAGGTACTATTGAAATTATACGCGAAGGGCTGGATCCATTATATCAATGGCCCGCAAACCCTGCCGGCTCCGCTTGGGAGGGAAGAAGAACAGGCGATTTTTGAAAAATTACAGACCCAGCCACAGTATGCAAAGGATATGCTGATCGTACATAATTTAAGGTTGGTCGTATATATCGCAAAAAAATTTGAATCTACAGGGATCAATGTCGAGGACCTGATCTCGATTGGAACGATCGGACTGATCAAGGCGGTAAATACTTTTTCACCGGAAAAAAATATTAAGTTGGCCACCTATGCCTCCCGCTGTATTGAAAATGAGATTCTGATGTATTTAAGAAAGAATACGCAATGCAAAAACGATATTTCGATCGACGAGCCGTTAAATATCGACTGGGATGGGAATGAACTGCTGCTTTCGGATATTTTGGGCACGGATAATGACAGCATCAACCGGGACATTGAACTGGAAGTAGAAAAGGATCTGCTGAAAAACTGTATTTCAAAGCTGGATGACCGGGAACGGCAGATCATGGAGATGCGATTTGGCCTGCAAGGTGGTAAAGAGATGACGCAAAAAGAGGTAGCGGACTTGATCGGGATCTCCCAGTCTTATATTTCCCGGTTGGAAAAGCGTATCATCCGACACTTAAAGCAGGAATTAGAAAGTGTGATCTGA
PROTEIN sequence
Length: 238
MQIFQTIYKKIDQVLLKLYAKGWIHYINGPQTLPAPLGREEEQAIFEKLQTQPQYAKDMLIVHNLRLVVYIAKKFESTGINVEDLISIGTIGLIKAVNTFSPEKNIKLATYASRCIENEILMYLRKNTQCKNDISIDEPLNIDWDGNELLLSDILGTDNDSINRDIELEVEKDLLKNCISKLDDRERQIMEMRFGLQGGKEMTQKEVADLIGISQSYISRLEKRIIRHLKQELESVI*