ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

L2_022_366G1_scaffold_376_21

Organism: L2_022_366G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 15
Location: 29178..29651

Top 3 Functional Annotations

Value Algorithm Source
Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen n=1 Tax=Veillonella sp. CAG:933 RepID=R5BRW9_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 158.0
  • Bit_score: 317
  • Evalue 4.30e-84
Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen {ECO:0000313|EMBL:CCX55467.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 158.0
  • Bit_score: 317
  • Evalue 6.10e-84
Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen similarity KEGG
DB: KEGG
  • Identity: 59.4
  • Coverage: 138.0
  • Bit_score: 173
  • Evalue 2.90e-41

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Veillonella sp. CAG:933 → Veillonella → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 474
TTGCGTTCTATTTTTCGTTCCATTATAATAGGGAATATAAAGTGGGGTGAATGTATGAAGGAGTCAAAAATATTAGAATATAAAGAAAATACTAATAATAATTTTTTGAAAACGGTTAGTGCCTATGCTAATTTTGGCGATGGGAAAATTATTTTTGGTATTGCCGATGATGGGACTGTTAAGGGTCTCTCTGATTTAAATGGAGATTGTCTGGCTATTGAAAACAAAATAAATGATAGTATTTTACCAAAGCCGGATTTTGAATTGATTGTAAATGAAAAAAATAGAACGATTGAATTATTAGTTAAAGAAGGTGAATATAAACCATATTTATACAATGGTACGGCCTATCGACGTAGTGATACATCTACGGTTAAAGTTGATCAAGTAGAATTGAAACGATTAGTATTAGCCGGAAAAAACATGGAGTTTGAAGATTTACCTTCCTTGGATCAAGACTTAAAGTTTACTTTG
PROTEIN sequence
Length: 158
LRSIFRSIIIGNIKWGECMKESKILEYKENTNNNFLKTVSAYANFGDGKIIFGIADDGTVKGLSDLNGDCLAIENKINDSILPKPDFELIVNEKNRTIELLVKEGEYKPYLYNGTAYRRSDTSTVKVDQVELKRLVLAGKNMEFEDLPSLDQDLKFTL