ggKbase home page

L2_022_366G1_scaffold_562_14

Organism: L2_022_366G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 15
Location: 15475..16146

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-24 subunit ECF subfamily n=1 Tax=Veillonella sp. CAG:933 RepID=R5BNY0_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 223.0
  • Bit_score: 443
  • Evalue 7.40e-122
RNA polymerase sigma-24 subunit ECF subfamily {ECO:0000313|EMBL:CCX55889.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 223.0
  • Bit_score: 443
  • Evalue 1.00e-121
sigH; putative RNA polymerase sigma-H factor similarity KEGG
DB: KEGG
  • Identity: 71.9
  • Coverage: 210.0
  • Bit_score: 301
  • Evalue 1.30e-79

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Veillonella sp. CAG:933 → Veillonella → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 672
ATGTGCGTTAATCCACGCGTAAATGATGAGTACCGTCGTTATGTAGATTTAACAGATGAACAAATTTGTAAATTAGCGCAAGAACAAGATGACCACTTAGCGGTGGACTATCTTGTGGATAAATATAAAAATTTTGTGCGTGCCAAGGCACGGTCTTATTTTTTAATCGGTGCTGATAAAGAGGACATTATCCAAGAGGGCATGATTGGCCTCTATAAAGCTACGCGCGATTTTAAAGGGGACCGACTGGCGTCGTTTAAGGCCTTTGCCGAGTTATGTGTAACACGGCAAATTATTACGGCTATTAAAACCGCGACGCGGCAAAAACATATTCCGCTCAATTCCTATATTTCGCTGAATAAGCCGATTTATGCGGATGAGACGGAACGAACCTTGATGGACGTATTAGTGGAAGGCCAGGGTACGGATCCTGAAGAATTATTCATTAATCGGGAAGAATTTTCCGATATTGAAGCAAAAATGGGATCTATATTAAGTGATTTGGAAGGCAAAGTGCTGATGGGGTACTTAGACGGCAAGTCGTATAATGAAATTGCCGCTGAATATCACCGCAGTGTCAAATCCATTGATAATGCATTGCAACGCGTAAAGCGTAAATTAGAAAAGTATTTGGAACATCGCAGTGAATTGGCGAAAAAGAATGAGCCTTAG
PROTEIN sequence
Length: 224
MCVNPRVNDEYRRYVDLTDEQICKLAQEQDDHLAVDYLVDKYKNFVRAKARSYFLIGADKEDIIQEGMIGLYKATRDFKGDRLASFKAFAELCVTRQIITAIKTATRQKHIPLNSYISLNKPIYADETERTLMDVLVEGQGTDPEELFINREEFSDIEAKMGSILSDLEGKVLMGYLDGKSYNEIAAEYHRSVKSIDNALQRVKRKLEKYLEHRSELAKKNEP*