ggKbase home page

L2_023_015G1_scaffold_119_2

Organism: L2_023_015G1_public_UNK

megabin RP 53 / 55 MC: 51 BSCG 51 / 51 MC: 50 ASCG 16 / 38 MC: 13
Location: comp(1293..1913)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-H factor n=3 Tax=Clostridium butyricum RepID=C4IF71_CLOBU similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 206.0
  • Bit_score: 403
  • Evalue 7.80e-110
RNA polymerase sigma-H factor {ECO:0000313|EMBL:ETI92014.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 206.0
  • Bit_score: 403
  • Evalue 1.10e-109
sigH; RNA polymerase sigma-H factor SigH similarity KEGG
DB: KEGG
  • Identity: 90.8
  • Coverage: 206.0
  • Bit_score: 374
  • Evalue 1.40e-101

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium butyricum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 621
TTGGAAGGATTTTTAGAATTTAAAGACAAACTAGATGAAGAGATTGTTATGGATGCTAAAGCTGGAAATAACAAAGCACAAGAGTATTTAATTTCCAAATATGAAAATTTTGTAAAAGCTAAAGCTAAATCATATTTTCTTATAGGCGCTGATAAAGAGGATATTTATCAAGAGGGTATGATTGGATTATATAAGGCTATACGTGATTTCAATCCTGAAAAATCTACATCTTTTAAAGCTTTTGCAGAAATATGTGTAACTAGACAGATTATTACAGCAATTAAAACTGCTACTAGACAAAAGCACATACCTTTAAATACTTATGTATCACTAAATAAACCGATATATGAAGAAGAATCAGAAAGAACTCTTTTGGATGTGTTATCTGGATTAAAAATATCTGATCCTGAAGAGTTGATGATTAGTAAAGAACAAATGCATTTTATAGAGGATAAAATTTCGAAAGTCTTGTCTGAGCTTGAAAAAGAAGTGTTAACATCTTATTTGGATGGTAAATCGTACCAAGAAATTGCGTGCGATTTAGAAAGGCATGCGAAATCTATAGATAATGCACTTCAAAGGGTGAAAAGAAAATTAGAAAAATGCTTGAAAGTAAAGTGA
PROTEIN sequence
Length: 207
LEGFLEFKDKLDEEIVMDAKAGNNKAQEYLISKYENFVKAKAKSYFLIGADKEDIYQEGMIGLYKAIRDFNPEKSTSFKAFAEICVTRQIITAIKTATRQKHIPLNTYVSLNKPIYEEESERTLLDVLSGLKISDPEELMISKEQMHFIEDKISKVLSELEKEVLTSYLDGKSYQEIACDLERHAKSIDNALQRVKRKLEKCLKVK*