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L2_023_126G1_scaffold_4625_2

Organism: L2_023_126G1_public_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 16
Location: comp(645..2006)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 453.0
  • Bit_score: 878
  • Evalue 3.40e-252
Transcription-repair-coupling factor n=1 Tax=Clostridium difficile CD34 RepID=T2VIF5_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 453.0
  • Bit_score: 878
  • Evalue 2.40e-252
mfd; transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 99.6
  • Coverage: 453.0
  • Bit_score: 878
  • Evalue 6.80e-253

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1362
TTGGCCCAACAACATTATAATACATTCAAAGAGAGGTTTGAAAATTATCCTTTGAGAGTAGAAGTTTTAAGTAGGTTTAAAACACCAAAACAACAAAAACAGATTATTGAAGATGCTAAAAAAGGATTAGTAGATATTTTAATTGGAACACATAGAATAATATCCAAAGATATAAATTTACCAAACTTAGGTCTTGTAGTCATTGATGAAGAACAAAGATTTGGAGTAAAACATAAAGAAGCTTTAAAGAAAATTAAATCTACAGTAGATGTACTTACACTTTCAGCAACTCCTATACCAAGAACATTACATATGTCTTTAAGTGGAATAAGAGACATGAGTGTTATAGAAGAACCTCCACAAGAAAGACATCCTGTAATAACATATGTTACAGAGAGTAAGGAAAGCGTAATTCAAGATGAGATAGAGAGAGACTTAAGTAGAGGTGGACAGGTATTTTTTGTATACAATAGAGTTGAACACATTGAAGAAATGGCAAGTATGATTCAAAAACTCGTACCAGATGCTAGAGTGGCTGTTGCACATGGAAGAATGACTTCTAAATCATTAGAAAATATAATCCTAGGATTTTTAAATAAAGATTATGATGTACTAGTCTGTACTACAATAATTGAAACTGGTATGGACATATCAAATGCAAATACAATGATTATATATGATGCAGATAAAATGGGATTGGCTCAACTTTACCAATTGAGAGGTAGGGTTGGAAGAAGTTCAAGACAAGGATATGCATATCTTTTGTATGAAAAAGATAAAACTTTAAGTGAGATAGCGGAGAAGAGATTAAAAGCTATCAGAGAATTTACAGAGTTTGGTTCTGGTTTTAAAATAGCAATGAGAGACCTTGAAATAAGAGGAGCAGGAAATATTTTAGGTTCTCAACAACATGGTCATATGGCAGTTATAGGTTATGATTTGTACGTTAAAATGCTTAATGATGCAATTAAAAAAGTCAAAGGTGAACCTATTGTGGAGGAAATTGATGTTGAAATAGATTTAAGTGTAAATGCATACATTCCAGATAATTATATCAAAGATGAGTTGATTAAAATTGAAATGTATAAGAAAATAGCTTCTATTGAAAACAAAGAAGACATGTTGGATATACAAGAAGAACTTGAGGATAGATTCTCTGATATACCTAAACCAGTCCAGACACTTCTTACAATAGCTTATATAAAATCGTTATGTAAGATATTAAAAATAGAAAAGATAAGACAATTAAAAGATGAAATATTATTAGTTCCAATAACAAAGTATAGAACTAAACAGAAAATAGGTTATAATATAGTTACAGAATTAGAAGAATTATTAGAAAAGATGTGCAAGGTAAAATAA
PROTEIN sequence
Length: 454
LAQQHYNTFKERFENYPLRVEVLSRFKTPKQQKQIIEDAKKGLVDILIGTHRIISKDINLPNLGLVVIDEEQRFGVKHKEALKKIKSTVDVLTLSATPIPRTLHMSLSGIRDMSVIEEPPQERHPVITYVTESKESVIQDEIERDLSRGGQVFFVYNRVEHIEEMASMIQKLVPDARVAVAHGRMTSKSLENIILGFLNKDYDVLVCTTIIETGMDISNANTMIIYDADKMGLAQLYQLRGRVGRSSRQGYAYLLYEKDKTLSEIAEKRLKAIREFTEFGSGFKIAMRDLEIRGAGNILGSQQHGHMAVIGYDLYVKMLNDAIKKVKGEPIVEEIDVEIDLSVNAYIPDNYIKDELIKIEMYKKIASIENKEDMLDIQEELEDRFSDIPKPVQTLLTIAYIKSLCKILKIEKIRQLKDEILLVPITKYRTKQKIGYNIVTELEELLEKMCKVK*