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L2_023_126G1_scaffold_4625_3

Organism: L2_023_126G1_public_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 16
Location: comp(1952..3076)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.8
  • Coverage: 363.0
  • Bit_score: 691
  • Evalue 4.80e-196
Transcription-repair-coupling factor n=1 Tax=Clostridium difficile DA00141 RepID=T3NLI0_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 97.8
  • Coverage: 363.0
  • Bit_score: 691
  • Evalue 3.40e-196
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 97.8
  • Coverage: 363.0
  • Bit_score: 691
  • Evalue 9.70e-197

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1125
AAATTAAATCTTGAAAGAGGTCTGGCTATTAAAAACCAAGGTAAATTGTTATATCACTATACAGATTTAGAGTACTTAGTAAAAGACAAGTCTGTGGTATTAAACTCGCTATTGCCAAAGTCTATAAATAACTTTTCTATAAAATCTATAATAAATTTTGAAAGTAGAGAAGTTCCTACATTTAATGGAAAGGTAGATTTGCTTGTAGAAGAATTAAATCGGCTGAAATATAATGGATACAAAATAATTTTAGCAACAAATACCTTAGAAAGAGCAAATAAATTAGGAAAAGATTTATTGGACAAAGGCTTAGAAACGACCATTTCTAAAGATAGAGATATTGAAATTAAATCTTCACAAGTTATAATTGTACCTGCACACATAAACAGTGGTTTTCAGTATAAATCTATAAAGTTTGTTGTTATAACAGATAACGAAATGATAGGTGTTTATAAAAGAGCGTCTAAGACTAGCAATAAAAAAGTTAAAAAGGGAAAGAAAATAGAATCCTTTTTAGATTTAAGTGTTGGAGACTATGTAGTTCATGAAAATAGTGGTGTAGGTAGATACACAGGAATTGAACAAATTACAGTCAATGCTATTAAAAAAGATTATATGAAAATAGTATATCAAGGTGGAGATAATCTATATGTGCCAATAGACCAGATGGACAAAGTACAAAAATATATTGGTGCAGAAGTAGAAAAAGTTAAGTTAAATAAGCTTGGAACAAATGAGTGGACGAAAGCAAAAGCAAAAGTTAAAAAAGAAATTGAAGATATGACAAAAGACTTGATTGAGCTTTATGCAAAACGTGAAAAAATACAAGGGTATAAGTTTTCAAAAGATACACCTTGGCAGGCAGAGTTTGAATCGTTGTTTCCATATCAAGAAACAGAAGACCAATTAAAGGCTATAGAAGAAACTAAAAAAGATATGGAATCAAGTAAGGTAATGGATAGGCTAGTATGTGGAGATGTTGGTTATGGAAAAACAGAGGTAGCTATTAGAAGTATTTTTAAAGCTTGTATGGACCAAAAACAAGTTGCTGTATTGTTCCAACAACAATATTGGCCCAACAACATTATAATACATTCAAAGAGAGGTTTGAAAATTATCCTTTGA
PROTEIN sequence
Length: 375
KLNLERGLAIKNQGKLLYHYTDLEYLVKDKSVVLNSLLPKSINNFSIKSIINFESREVPTFNGKVDLLVEELNRLKYNGYKIILATNTLERANKLGKDLLDKGLETTISKDRDIEIKSSQVIIVPAHINSGFQYKSIKFVVITDNEMIGVYKRASKTSNKKVKKGKKIESFLDLSVGDYVVHENSGVGRYTGIEQITVNAIKKDYMKIVYQGGDNLYVPIDQMDKVQKYIGAEVEKVKLNKLGTNEWTKAKAKVKKEIEDMTKDLIELYAKREKIQGYKFSKDTPWQAEFESLFPYQETEDQLKAIEETKKDMESSKVMDRLVCGDVGYGKTEVAIRSIFKACMDQKQVAVLFQQQYWPNNIIIHSKRGLKIIL*