ggKbase home page

L2_026_000M1_scaffold_426_25

Organism: L2_026_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 16
Location: 24967..26550

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IGA5_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 527.0
  • Bit_score: 1027
  • Evalue 0.0
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 527.0
  • Bit_score: 1027
  • Evalue 0.0
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 58.9
  • Coverage: 530.0
  • Bit_score: 579
  • Evalue 7.60e-163

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Phascolarctobacterium sp. CAG:207 → Phascolarctobacterium → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1584
ATGGCTAATACTAAAATTTCTGCCGACCAGGTAGAGGAATTATTACTTAAAGGCAAATCTCACGGCGGTGTTCTCACTTATCGTGAAATTATGGATTCTATGCAAAACGTAGAAGATATGACTCCGGACGATATGGACAGTATGTATGAGTTGATTGCCCAAAAAGGCATCGACGTAGTCGACGAAAACAGCGATGATGATGTACTGCCGGTCAACGATGATGATACGGAAGAAATCAATGAAGCAGAGCTGGCTAATCTCAGTGTGCCTGAAGGGGTAAGCATTGATGATCCGGTCAGGATGTATCTTAAGGAGATCGGCCGTGTACCGCTTTTGATCGGCGAAGATGAAATCAAGCTTGCTAAACGTATGGATAAGGGAAAACAGGCCGAAAGGCTGATGAATTCGTCATTGCCTGCAGCTTTGGTTCCTGCTTACAGCGGTAAAGAAAAAACTGCTACTCTGATCAAAAAAATCAAGAAGCATTTGGAACAGGAACATAAAAGCTGTGAACTGCGCAATGTTGAAAAAGTGCTTGGAATTATTGCGAGGGCGGCTGCAGCGGGTACTCCCTGTACATTGTCTGAATATCAGGATCTTATTGTTGAGTTTACTAAAGATGAGCGTTTGCATTTACAACGTATGATGCAGGAACACAATGTTATGATCCCAGACTGTGATAAAATGGTAGTCGATCGTCAGACCAGTGATAAAGAAGTACATGCGCTGTTTGAGATCAAGACTTTACTTGACGAGATCAAGCGCCGCTTACCAGAAGAAAATGATGCTGCTGTTTTTGATAGCTATATGACGTTGGAAGAAGATTACGGAAAACTTTTGGAAGAAGTTTTTGAAGAAGGAGAAGCCGCAAAACGATGTTTATCGGAAGCTAATCTTCGTTTGGTTGTCAGCATTGCAAAACGTTATGTTGGCCGGGGAATGCTCTTTTTAGACCTTATTCAGGAAGGTAACCTTGGGCTTATCAAAGCAGTAGAAAAATTTGATTATAATAAAGGCTTTAAATTCAGTACTTATGCCACTTGGTGGATTCGTCAGGCTATTACACGCGCTATTGCTGACCAGGCCCGCACCATTCGTATACCTGTGCATATGGTTGAAACAATCAATAAATTGATTCGCGTATCACGTCAACTGCTGCAGGAACTTGGGCGGGAACCTATGCCGGAAGAGATTGCAAAGGAAATGGATACTACTGTTGATCGTGTTCGTGAGATTATGAAAATCGCACAGGAACCGGTATCATTGGAAACTCCTATCGGTGAAGAAGAAGATTCGCATTTGGGGGATTTTATTGAAGATCATGATGCACCGGCACCAGCTGATGCTGCTTCGTTCACTTTATTGCGTGAGCAGTTGGAAGAAGTCTTGGAAACACTGACTGTGCGTGAAAAGAAGGTTTTAGAACTGCGTTTTGGTTTGGAAGACGGGCGTTCACGTACCCTGGAAGAAGTAGGGCAGCATTTTGGTGTAACCAGAGAACGTATTCGTCAAATCGAGGCCAAAGCTTTACGTAAGCTGCGTCATCCAAGCCGCAGTAAACGGTTAAAAGACTTCTTGGAATAA
PROTEIN sequence
Length: 528
MANTKISADQVEELLLKGKSHGGVLTYREIMDSMQNVEDMTPDDMDSMYELIAQKGIDVVDENSDDDVLPVNDDDTEEINEAELANLSVPEGVSIDDPVRMYLKEIGRVPLLIGEDEIKLAKRMDKGKQAERLMNSSLPAALVPAYSGKEKTATLIKKIKKHLEQEHKSCELRNVEKVLGIIARAAAAGTPCTLSEYQDLIVEFTKDERLHLQRMMQEHNVMIPDCDKMVVDRQTSDKEVHALFEIKTLLDEIKRRLPEENDAAVFDSYMTLEEDYGKLLEEVFEEGEAAKRCLSEANLRLVVSIAKRYVGRGMLFLDLIQEGNLGLIKAVEKFDYNKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVSRQLLQELGREPMPEEIAKEMDTTVDRVREIMKIAQEPVSLETPIGEEEDSHLGDFIEDHDAPAPADAASFTLLREQLEEVLETLTVREKKVLELRFGLEDGRSRTLEEVGQHFGVTRERIRQIEAKALRKLRHPSRSKRLKDFLE*