ggKbase home page

L2_031_000G1_scaffold_15251_1

Organism: L2_031_000G1_public_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 17
Location: 3..410

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXG0_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 98.3
  • Coverage: 120.0
  • Bit_score: 229
  • Evalue 1.70e-57
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.3
  • Coverage: 120.0
  • Bit_score: 229
  • Evalue 2.40e-57
sigK; RNA polymerase sigma-28 factor similarity KEGG
DB: KEGG
  • Identity: 56.8
  • Coverage: 118.0
  • Bit_score: 120
  • Evalue 2.50e-25

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Subdoligranulum sp. 4_3_54A2FAA → Subdoligranulum → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 408
ATACGCCGGCGCCGCATTGGCGGGAGGATAGCAAATGAGGTGCTCATGCAGTTCCGAGCGGGTAAAAAAAGCCAGAACGACGTGTCTATCCAGGAGCCCATCGACAGCGATAAGGACGGGAACAGCCTGACACTGAATGACGTAGTGGCCGATACCTTCGACGTGCACGAGGACTACGAGCGTAAGGAGGAGACCGAGGCGCTCTACCGTGTGGTGAACCGCCTCTCCGGCCGGGAACGGCAGATCGTCATCATGCGCTACGGCCTTTCGGGCACGCAGCCGCTGACACAGCAGCAGGTGGCGGATATCCTGCACATCAGCCGCAGCTATGTATCCCGCATCGAGAAAAAAGCGCTGGAAGAGCTGCGCGCAATGATGCGAAAAGGAGCGAGTGCGGGAAAGGGTTGA
PROTEIN sequence
Length: 136
IRRRRIGGRIANEVLMQFRAGKKSQNDVSIQEPIDSDKDGNSLTLNDVVADTFDVHEDYERKEETEALYRVVNRLSGRERQIVIMRYGLSGTQPLTQQQVADILHISRSYVSRIEKKALEELRAMMRKGASAGKG*