ggKbase home page

L2_031_061G1_scaffold_87_22

Organism: L2_031_061G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 15 / 38 MC: 15
Location: comp(26081..26566)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C8V8_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 161.0
  • Bit_score: 320
  • Evalue 5.20e-85
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 161.0
  • Bit_score: 320
  • Evalue 7.30e-85
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 51.9
  • Coverage: 158.0
  • Bit_score: 156
  • Evalue 4.80e-36

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lachnospiraceae bacterium 7_1_58FAA → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 486
TTGGAACAGACTGTCCGCCAGCAGTTGAGCGACTATATTGTGGCTCACCAGGAGGAATTTTACCGCCTGGCGTACAGCTATGTCAAAAACCGGGATGCGGCGCTGGACGTGGTGCAGGAGAGCATTGTCAAGGCTCTGGCCAAGTCGGATACACTGCGCAGGCCGGAGTATCTCAAAACCTGGTTTTACCGCATCCTGCTCAACGAGAGTATGAACCACCACCGCCGCGCCAAACGGCTGGTACCCCTGGAGGACACCCTGCTGGAAACCCCGGTGCCCGCCCGGGACCCCGGGGAGAGGCTGGATCTCTATGACGCCATCGAGCGCCTGGACTGGAAGGAGCAGACCGTGGTGCGCCTGCGCTTTTTCGAGGACATGAAGCTGGAGGAGATTGCGCGGGTGACCAACACCAACTTGAACACCGTGAAATCCAGGCTCTATAAGAGCCTGCGCCGTCTGCGGGAGCTGACAGAGGAGGAGTGCTGA
PROTEIN sequence
Length: 162
LEQTVRQQLSDYIVAHQEEFYRLAYSYVKNRDAALDVVQESIVKALAKSDTLRRPEYLKTWFYRILLNESMNHHRRAKRLVPLEDTLLETPVPARDPGERLDLYDAIERLDWKEQTVVRLRFFEDMKLEEIARVTNTNLNTVKSRLYKSLRRLRELTEEEC*