ggKbase home page

L2_037_240G1_scaffold_249_8

Organism: L2_037_240G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 16
Location: 6585..7208

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-H factor n=3 Tax=Lachnospiraceae RepID=S2YKJ5_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 207.0
  • Bit_score: 404
  • Evalue 3.50e-110
RNA polymerase sigma-H factor {ECO:0000313|EMBL:EPD59664.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 207.0
  • Bit_score: 404
  • Evalue 5.00e-110
RNA polymerase, sigma 30 subunit, SigH similarity KEGG
DB: KEGG
  • Identity: 66.8
  • Coverage: 202.0
  • Bit_score: 275
  • Evalue 7.00e-72

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Coprococcus sp. HPP0074 → Coprococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 624
ATGGAAACGTATGAGAAAATGACAGATGAGCAGCTGATCGCGACTCTCCGGAAAGGAGAGTCTGAGATCATGGATTTCATTATGGAAAAATATAAATATCTCGTGCGAAAAAAGGCAAAGGCGATGTTTCTTCTCGGAGGAGAAAATGATGACCTGATCCAGGAGGGGATGATCGGACTTTTTAAAGCGGTCCGGGATTATGATCTTGCGCTGGAAACTTCGTTTGCAAGCTTTGCAGAACTATGCATCTCGAGACAGATGTACAGTGCGATTGAGGCATCAAAGAGAAAAAAACATATTCCTCTGAATTCTTATGTTTCTCTTTACGAGGAGGGAGATGCGTCTGAGGAAAACAAGCGTCCGCCGTTGATTGATACGATCCAGCCGGATAGGGAGAACAACCCGGAAGAATTGTTCCTGAATAAGGAATATTTCCGGCAGGCAGAAAGTATGCTCAAAGAACAGCTCAGTGATCTGGAAAACCGTGTCTTATACTTGCATCTGCTCGGCACGGAGTACCAGACGATCGCGAAATTGATCGGGAAAAGTCCCAAAGCAGTAGATAATGCATTGCAGAGGATTAAAAGCAAGGCACAAGGAATTTTAAACCATAAGAAAGAATGA
PROTEIN sequence
Length: 208
METYEKMTDEQLIATLRKGESEIMDFIMEKYKYLVRKKAKAMFLLGGENDDLIQEGMIGLFKAVRDYDLALETSFASFAELCISRQMYSAIEASKRKKHIPLNSYVSLYEEGDASEENKRPPLIDTIQPDRENNPEELFLNKEYFRQAESMLKEQLSDLENRVLYLHLLGTEYQTIAKLIGKSPKAVDNALQRIKSKAQGILNHKKE*