ggKbase home page

L2_038_000M1_scaffold_483_5

Organism: L2_038_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 18
Location: 3886..4563

Top 3 Functional Annotations

Value Algorithm Source
Fimbrial assembly protein PilC n=1 Tax=Roseburia sp. CAG:18 RepID=R5V2K2_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 97.9
  • Coverage: 193.0
  • Bit_score: 365
  • Evalue 2.00e-98
Fimbrial assembly protein PilC {ECO:0000313|EMBL:CCZ77621.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.9
  • Coverage: 193.0
  • Bit_score: 365
  • Evalue 2.80e-98
Type II secretory pathway, component PulF similarity KEGG
DB: KEGG
  • Identity: 40.0
  • Coverage: 165.0
  • Bit_score: 129
  • Evalue 6.80e-28

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Roseburia sp. CAG:18 → Roseburia → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 678
ATGGCAAAATACACCGGTTCCAATGCAAAACCCAAACTGCAGCTGACCGGGACCACACGGACGCTTCTGCACATCAGTACCATTCTCAATCATTATATGCTTGGGTTTATCATTGCCTTTCTGGTATTGCTTATCATCTGTATGATTTTATATCACACCGATCTCGGGCGCGTATTGTTCCTCGGACAGAAACTTGCCATGACGGTTGCCTCAGGACGCGTTGCAAACTGCCTGTATCTGGTTCTCTCCAGCGGACTCGACAGTAATATCGGTCTTACCCCGGCACGCGAACTTGTCAATAATCCGCATATGAAGGCACTTATCGACAAATGTCACGAGAATATCCGCCACGGGGAATCATTCGACAAAGCACTGCTGCTGTCCGGCATCTTTTCCCAGATGTACGCCAGCTGGATTGTAATCGGTTCCCGGACCGGCGAAATGGAAAGCATTGTTTCCCAGCGGGAGATCAATACCGATACCGCAAGCTATCTGACGGCACTTCGTGCTGCATTGCGCCAGATCAACGGTATTATCTACACTTCTGCCGCAGAAAATATGATCGCCATGGACAGCAGCATCTTACAGCTTTATAAAGACGGACGGATCGACAAACACACCGCCATCTCGGAAGCGGTCAATCCGGAGATCATGTCCAAACGTCTGAATCTCTTATAA
PROTEIN sequence
Length: 226
MAKYTGSNAKPKLQLTGTTRTLLHISTILNHYMLGFIIAFLVLLIICMILYHTDLGRVLFLGQKLAMTVASGRVANCLYLVLSSGLDSNIGLTPARELVNNPHMKALIDKCHENIRHGESFDKALLLSGIFSQMYASWIVIGSRTGEMESIVSQREINTDTASYLTALRAALRQINGIIYTSAAENMIAMDSSILQLYKDGRIDKHTAISEAVNPEIMSKRLNLL*