ggKbase home page

L2_038_000M1_scaffold_28240_2

Organism: L2_038_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 18
Location: comp(250..777)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor sigma-70 family n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7GZY3_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 175.0
  • Bit_score: 349
  • Evalue 1.10e-93
RNA polymerase sigma factor sigma-70 family {ECO:0000313|EMBL:CDE31517.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 175.0
  • Bit_score: 349
  • Evalue 1.60e-93
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 98.3
  • Coverage: 175.0
  • Bit_score: 346
  • Evalue 2.70e-93

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ruminococcus sp. CAG:90 → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 528
ATGAATAATCAGACATTTGAAGAGTTTTATCTTAAATACCGAAAAATATCCAGAGGGTATGCGTATGGGGTTCTCCATGACTGGAGTACTGCTGATGATGTCAGTCAGGATGTACTTTACAAAATGTATACTATAAAGGATGGCCTGAATATTGATAATGAAAAGATGATGTTTTCTCTGATCAAGAGGGCATCTATGAATAAGGCTTTGGATTATATAAAGAAATCAAGCTCCAAGCATGAGTTTGTCTGTCAGGAAGAAGTTGCGGCATTTCTGGAAGAACAGAATTCGGTCGATGCGGAAGAGGTATTTCTGCGTAAAGAGAAGAAAGAATTTATGTATATGGTGCTGAGAAGATTTCGAAAGGAACAGCCGATAAATTATGAGATCTTAATTCAGGTCAAATATCTGGAGATTTCCGTTGAAACAGTTGCAGAAGAATATGGTCTGACGAAAAGTGGTGTCAATAACAGGATATATAAAGCGAAGCGCTGGCTGCAGGAAGAATTTCGCAAAGTATACGAATAA
PROTEIN sequence
Length: 176
MNNQTFEEFYLKYRKISRGYAYGVLHDWSTADDVSQDVLYKMYTIKDGLNIDNEKMMFSLIKRASMNKALDYIKKSSSKHEFVCQEEVAAFLEEQNSVDAEEVFLRKEKKEFMYMVLRRFRKEQPINYEILIQVKYLEISVETVAEEYGLTKSGVNNRIYKAKRWLQEEFRKVYE*