ggKbase home page

L2_040_010G1_scaffold_1169_2

Organism: L2_040_010G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 14
Location: comp(397..960)

Top 3 Functional Annotations

Value Algorithm Source
RNA methyltransferase, RsmD family {ECO:0000313|EMBL:EES36448.1}; EC=2.1.1.- {ECO:0000313|EMBL:EES36448.1};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 187.0
  • Bit_score: 370
  • Evalue 9.40e-100
Ribosomal RNA small subunit methyltransferase D (EC:2.1.1.-) similarity KEGG
DB: KEGG
  • Identity: 99.4
  • Coverage: 180.0
  • Bit_score: 353
  • Evalue 3.10e-95
RNA methyltransferase, RsmD family n=21 Tax=Staphylococcus epidermidis RepID=C5QWB2_STAEP similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 187.0
  • Bit_score: 370
  • Evalue 6.70e-100

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Staphylococcus epidermidis → Staphylococcus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 564
ATGAAATGGAAGTGTGAGTCAATGCGTGTAATTGCGGGTAAGCATAAAAGTAAAGCGCTAGAAAGTTTAGAGGGGCGAAATACTCGCCCAACTATGGATAAAGTTAAGGAAGGTATTTTTAATAGTTTATATGATGTTTCTGGTTTAGGATTAGACTTATTTGCCGGTAGTGGTGCACTAGGCATTGAAGCATTATCACGTGGTATGGATAAAATGATTTTTGTAGATCAAAATTTTAAAGCGGTCAAGGTTATAAAAGCTAATCTTAATCAATTGGATTTAATGTCACAAGCAGAAGTCTATAAAAATAATGCTGACAGAGCACTTAAAGCACTTGCTAAACGAGAAGTACAATTCGATGTTATCTTTTTAGATCCACCTTATAATAAAGGGCTTATAAATGAGGCGATTTCTCGTATAGCAGAGTTTAACTTATTAAAAGAAAATGGTATTATCGTTTGTGAGTTTAGTCATAATGAAGAAATAACAATTGCGCCATTTCAAATGATTAAGCGTTATCATTATGGTTTGACAGATACTTTGTTACTTGAAAAAGGAGAATAA
PROTEIN sequence
Length: 188
MKWKCESMRVIAGKHKSKALESLEGRNTRPTMDKVKEGIFNSLYDVSGLGLDLFAGSGALGIEALSRGMDKMIFVDQNFKAVKVIKANLNQLDLMSQAEVYKNNADRALKALAKREVQFDVIFLDPPYNKGLINEAISRIAEFNLLKENGIIVCEFSHNEEITIAPFQMIKRYHYGLTDTLLLEKGE*