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L2_040_365G1_public_UNK

In projects: L2_040_365G1_public

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 40.49 Longest contig: 611.74 Kbp Bin length: 98.46 Mbp GC content: 47.09 %
Contigs count: 20686 Features count: 107071 rRNAs count: 22 tRNAs count: 1494

Genome completeness

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 16
Displaying items 20251-20300 of 20686 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
L2_040_365G1_scaffold_12508
Species: Acinetobacter sp. CAG:196 (50%)
2 1465 bp 60.61 3.69 100.75
L2_040_365G1_scaffold_3600
Species: [Clostridium] clostridioforme (100%)
3 4094 bp 36.27 12.90 100.76
L2_040_365G1_scaffold_11277
Species: Lachnospiraceae bacterium 2_1_58FAA (66.67%)
3 1581 bp 42.19 3.51 100.76
L2_040_365G1_scaffold_14483
Species: [Clostridium] spiroforme (50%)
2 1316 bp 36.47 5.81 100.76
L2_040_365G1_scaffold_11447
Species: Hungatella hathewayi (100%)
3 1566 bp 49.94 6.13 100.77
L2_040_365G1_scaffold_4386
Species: Lachnospiraceae bacterium 3_1_57FAA_CT1 (75%)
4 3376 bp 50.18 4.04 100.77
L2_040_365G1_scaffold_20110
Order: Clostridiales (100%)
4 1036 bp 38.22 2.90 100.77
L2_040_365G1_scaffold_10411
Species: Brachyspira sp. CAG:484 (100%)
2 1679 bp 37.16 5.00 100.77
L2_040_365G1_scaffold_9423
Species: Ruminococcus bicirculans (100%)
3 1804 bp 44.24 8.48 100.78
L2_040_365G1_scaffold_7904
Order: Clostridiales (75%)
4 2045 bp 50.56 5.79 100.78
L2_040_365G1_scaffold_9573
Species: Lachnospiraceae bacterium 2_1_58FAA (50%)
2 1783 bp 46.89 4.71 100.79
L2_040_365G1_scaffold_20643
Species: Ruminococcus gnavus CAG:126 (100%)
2 1015 bp 46.90 3.55 100.79
L2_040_365G1_scaffold_17667
Species: Clostridium sp. D5 (50%)
2 1140 bp 46.49 3.16 100.79
L2_040_365G1_scaffold_20706
Species: Eggerthella lenta (50%)
2 1012 bp 64.23 2.67 100.79
L2_040_365G1_scaffold_17723
Species: Lachnospiraceae bacterium 5_1_57FAA (100%)
2 1137 bp 54.62 2.90 100.79
L2_040_365G1_scaffold_13486
Species: Hungatella hathewayi (100%)
3 1387 bp 48.95 4.54 100.79
L2_040_365G1_scaffold_12193
Genus: Bacteroides (66.67%)
3 1494 bp 34.00 122.39 100.80
L2_040_365G1_scaffold_11033
Species: Lachnospiraceae bacterium 3_1_57FAA_CT1 (100%)
2 1607 bp 49.53 3.83 100.81
L2_040_365G1_scaffold_13459
Species: Hungatella hathewayi (50%)
2 1967 bp 53.74 4.19 100.81
L2_040_365G1_scaffold_16057
Order: Clostridiales (66.67%)
3 1223 bp 44.48 5.52 100.82
L2_040_365G1_scaffold_14134
Species: Bacteroides dorei (50%)
2 1339 bp 39.58 161.87 100.82
L2_040_365G1_scaffold_18737
Species: Hungatella hathewayi (100%)
2 1092 bp 44.32 3.16 100.82
L2_040_365G1_scaffold_11350
Species: Dorea formicigenerans (50%)
2 1574 bp 42.63 5.72 100.83
L2_040_365G1_scaffold_14416
Species: Firmicutes bacterium CAG:41 (100%)
2 1321 bp 41.86 3.18 100.83
L2_040_365G1_scaffold_19059 2 1077 bp 50.14 4.46 100.84
L2_040_365G1_scaffold_16625
Species: Klebsiella oxytoca (50%)
4 1190 bp 65.38 3.40 100.84
L2_040_365G1_scaffold_16642
Species: Klebsiella oxytoca (75%)
4 1190 bp 65.29 3.78 100.84
L2_040_365G1_scaffold_14597
Species: Hungatella hathewayi (50%)
2 1309 bp 55.69 3.90 100.84
L2_040_365G1_scaffold_8038
Species: [Clostridium] bolteae (100%)
3 2023 bp 48.00 4.97 100.84
L2_040_365G1_scaffold_26160
Species: Eubacterium ramulus (50%)
2 1184 bp 30.74 48.52 100.85
L2_040_365G1_scaffold_19363
Species: Firmicutes bacterium CAG:110 (50%)
2 1065 bp 42.63 6.06 100.85
L2_040_365G1_scaffold_13088
Species: [Clostridium] asparagiforme (50%)
2 1416 bp 45.48 4.87 100.85
L2_040_365G1_scaffold_33427
Species: Parabacteroides sp. 20_3 (50%)
2 1178 bp 56.03 233.53 100.85
L2_040_365G1_scaffold_9736 2 1761 bp 37.54 4.34 100.85
L2_040_365G1_scaffold_10796
Species: Hungatella hathewayi (100%)
2 1636 bp 55.81 4.77 100.86
L2_040_365G1_scaffold_11958
Genus: Eggerthella (66.67%)
3 1517 bp 67.57 5.34 100.86
L2_040_365G1_scaffold_19731
Species: Hungatella hathewayi (100%)
2 1050 bp 46.67 3.86 100.86
L2_040_365G1_scaffold_19814
Species: Clostridium sp. FS41 (100%)
2 1047 bp 49.09 3.30 100.86
L2_040_365G1_scaffold_13462
Species: [Ruminococcus] gnavus (50%)
2 1389 bp 44.56 4.75 100.86
L2_040_365G1_scaffold_17310
Species: Lachnospiraceae bacterium 2_1_58FAA (100%)
2 1157 bp 37.34 3.24 100.86
L2_040_365G1_scaffold_20143
Species: Anaerotruncus sp. G3(2012) (100%)
2 1035 bp 54.59 5.07 100.87
L2_040_365G1_scaffold_6087
Species: Bacteroides dorei (50%)
2 2516 bp 42.97 199.07 100.87
L2_040_365G1_scaffold_20429
Species: Hungatella hathewayi (100%)
2 1023 bp 50.24 5.28 100.88
L2_040_365G1_scaffold_20589
Species: [Clostridium] spiroforme (50%)
2 1017 bp 31.07 2.65 100.89
L2_040_365G1_scaffold_5868
Species: Ruminococcaceae bacterium 585-1 (50%)
4 2590 bp 57.68 6.02 100.89
L2_040_365G1_scaffold_7487
Species: Clostridium sp. 7_3_54FAA (50%)
2 2132 bp 36.68 4.57 100.89
L2_040_365G1_scaffold_7515
Species: Hungatella hathewayi (100%)
2 2126 bp 51.74 5.57 100.89
L2_040_365G1_scaffold_18125
Species: Hungatella hathewayi (100%)
2 1118 bp 54.38 3.89 100.89
L2_040_365G1_scaffold_14155
Species: Lachnospiraceae bacterium 3_1_57FAA_CT1 (50%)
2 1338 bp 49.18 6.05 100.90
L2_040_365G1_scaffold_8116
Species: Eggerthella sp. HGA1 (100%)
2 2007 bp 68.11 3.59 100.90
Displaying items 20251-20300 of 20686 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.