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L2_047_362G1_public_UNK

In projects: L2_047_362G1_public
Displaying items 651-700 of 18986 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
L2_047_362G1_scaffold_4864
Order: Clostridiales (85.71%)
7 3809 bp 47.57 47.30 93.73
L2_047_362G1_scaffold_12823
Species: [Ruminococcus] gnavus (66.67%)
3 1546 bp 54.53 47.06 100.71
L2_047_362G1_scaffold_2069
Species: Anaerostipes hadrus (60%)
5 8780 bp 37.51 46.88 83.17
L2_047_362G1_scaffold_14489
Species: Tyzzerella nexilis (100%)
2 1781 bp 36.22 46.83 71.76
L2_047_362G1_scaffold_7146
Species: Lachnospiraceae bacterium A2 (50%)
4 2663 bp 48.37 46.75 89.67
L2_047_362G1_scaffold_14054
Species: [Clostridium] citroniae (100%)
2 1413 bp 47.70 46.71 96.82
L2_047_362G1_scaffold_14611
Species: Lachnospiraceae bacterium 7_1_58FAA (50%)
2 1360 bp 56.10 46.65 99.04
L2_047_362G1_scaffold_15067
Species: Holdemania filiformis (100%)
1 1320 bp 53.03 46.59 100.00
L2_047_362G1_scaffold_13829
Species: Escherichia coli (100%)
3 2026 bp 50.35 46.50 71.22
L2_047_362G1_scaffold_2922
Species: Pseudoflavonifractor capillosus (50%)
10 8421 bp 47.23 46.42 93.16
L2_047_362G1_scaffold_5222
Order: Clostridiales (90%)
10 7359 bp 52.51 46.37 95.76
L2_047_362G1_scaffold_4165
Species: Ruminococcaceae bacterium D16 (66.67%)
3 4434 bp 45.85 46.21 96.62
L2_047_362G1_scaffold_15616
Species: Coprococcus sp. HPP0048 (100%)
1 1273 bp 45.64 46.19 99.92
L2_047_362G1_scaffold_4961
Species: Ruminococcus lactaris (50%)
4 3721 bp 34.51 46.04 71.51
L2_047_362G1_scaffold_9289
Species: Pseudoflavonifractor capillosus (50%)
4 2103 bp 57.87 45.93 90.87
L2_047_362G1_scaffold_13343
Species: Escherichia coli (100%)
1 1490 bp 48.12 45.91 99.87
L2_047_362G1_scaffold_9864
Species: Firmicutes bacterium CAG:646 (50%)
2 2277 bp 54.59 45.78 92.62
L2_047_362G1_scaffold_20609
Species: Lachnospiraceae bacterium 6_1_37FAA (66.67%)
3 1532 bp 35.64 45.72 64.03
L2_047_362G1_scaffold_591
Order: Clostridiales (84.85%)
33 32552 bp 37.47 45.58 90.46
L2_047_362G1_scaffold_7926
Species: [Ruminococcus] gnavus (66.67%)
3 3784 bp 43.16 45.55 92.28
L2_047_362G1_scaffold_7807
Order: Clostridiales (80%)
5 2979 bp 40.89 45.52 73.62
L2_047_362G1_scaffold_8222
Species: Faecalibacterium prausnitzii (100%)
1 2353 bp 48.49 45.45 70.76
L2_047_362G1_scaffold_3168
Order: Clostridiales (83.33%)
6 5773 bp 37.94 45.34 68.96
L2_047_362G1_scaffold_10159
Order: Clostridiales (80%)
5 2479 bp 49.33 44.90 86.53
L2_047_362G1_scaffold_1423
Order: Clostridiales (72.73%)
11 12964 bp 36.54 44.88 89.63
L2_047_362G1_scaffold_18735
Species: Anaerostipes hadrus (100%)
1 1050 bp 30.86 44.86 78.00
L2_047_362G1_scaffold_1085
Order: Clostridiales (82.35%)
17 17484 bp 38.50 44.75 91.97
L2_047_362G1_scaffold_1499 16 15575 bp 29.32 44.74 82.81
L2_047_362G1_scaffold_6255
Order: Clostridiales (66.67%)
6 4976 bp 38.87 44.64 54.98
L2_047_362G1_scaffold_11899
Order: Clostridiales (66.67%)
3 1660 bp 43.01 44.64 91.63
L2_047_362G1_scaffold_8887
Species: Clostridium sp. ATCC BAA-442 (100%)
2 2195 bp 47.93 44.56 94.03
L2_047_362G1_scaffold_1211
Phylum: Firmicutes (64.29%)
28 18594 bp 27.59 44.46 77.67
L2_047_362G1_scaffold_11435
Genus: Clostridium (100%)
3 1725 bp 24.41 44.43 96.35
L2_047_362G1_scaffold_3114
Order: Clostridiales (80%)
5 5863 bp 37.25 44.39 82.74
L2_047_362G1_scaffold_4010
Order: Clostridiales (50%)
4 4581 bp 37.70 44.37 90.70
L2_047_362G1_scaffold_414
Order: Clostridiales (85.37%)
41 43872 bp 35.02 44.31 90.44
L2_047_362G1_scaffold_19310
Species: Faecalibacterium prausnitzii (100%)
2 1017 bp 47.00 44.25 95.28
L2_047_362G1_scaffold_5104
Order: Clostridiales (100%)
9 5233 bp 39.98 44.23 88.46
L2_047_362G1_scaffold_13268
Species: Subdoligranulum variabile (100%)
1 1498 bp 54.41 44.16 99.93
L2_047_362G1_scaffold_665
Order: Clostridiales (75%)
28 28698 bp 37.74 44.10 92.89
L2_047_362G1_scaffold_33005
Order: Clostridiales (66.67%)
3 1018 bp 59.04 44.06 69.55
L2_047_362G1_scaffold_6408
Species: Anaerostipes hadrus (50%)
4 2939 bp 35.62 43.94 73.90
L2_047_362G1_scaffold_12947
Species: [Ruminococcus] gnavus (50%)
2 1534 bp 45.05 43.90 89.96
L2_047_362G1_scaffold_1628
Order: Clostridiales (92.86%)
14 11146 bp 35.04 43.83 85.94
L2_047_362G1_scaffold_9563
Species: Tyzzerella nexilis (50%)
4 2047 bp 40.25 43.60 96.58
L2_047_362G1_scaffold_10230
Order: Clostridiales (100%)
3 1921 bp 39.04 43.49 100.26
L2_047_362G1_scaffold_19131
Species: Dorea formicigenerans (100%)
1 1026 bp 44.25 43.42 99.71
L2_047_362G1_scaffold_541 42 34865 bp 46.85 43.35 92.22
L2_047_362G1_scaffold_10611
Species: [Clostridium] citroniae (100%)
1 1854 bp 40.88 43.20 80.26
L2_047_362G1_scaffold_5748
Phylum: Firmicutes (57.14%)
7 5227 bp 50.91 43.13 21.92
Displaying items 651-700 of 18986 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.