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L3_058_072G1_scaffold_286_18

Organism: L3_058_072G1_public_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: comp(15465..15947)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=159 Tax=Clostridium difficile RepID=C9XQJ7_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 160.0
  • Bit_score: 315
  • Evalue 2.20e-83
sigV; RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 160.0
  • Bit_score: 315
  • Evalue 6.20e-84
Extra-Cytoplasmic Function sigma factors, ECF family {ECO:0000313|EMBL:CDS84605.1}; Extracytoplasmic function (ECF) sigma factorcsfV {ECO:0000313|EMBL:CEJ98149.1}; RNA polymerase ECF(Extracytoplasmic function)-type sigma factor (Sigma(V)) {ECO:0000313|EMBL:CDS86688.1}; RNA polymerase sigma factor {ECO:0000313|EMBL:CKH06833.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 160.0
  • Bit_score: 315
  • Evalue 3.10e-83

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 483
ATGTTTAAGAGTTTAAAGAGAACGAAAGTTGAGAAATACATTATCGATAATAAAGACTCTTTTTATAGAATAGCATATAGTTATACGAAGAATGAAGAAGATGCCTTAGATGTGGTTCAAGAAGCCATGTATAAGGCACTATACTCAGTGGAAAATATTAAAGAAGTAAATTATATAAAGACATGGTTTTATAAAATTTTAGTTAGAACGAGTATAGATTTTATTAGAAAAAACCGTAAATATAATAATATGACAGATATTGACCTTATAGATGAGACTGGAGAGTATGATAAATATACTGATTTGGATTTAAGAAGAGCTTTGGAAGAATTACCTATTGAATACAAATCTATTATAATATTAAGATTTTTTGAAGATTTAAAGATTGAAGAAGTAGCAATAATATTGGATGAAAATGTGAATACTGTTAAAACTAGGTTATATACTGCTTTAAAAAAACTAAAATTAAAAATTGAAGAGTAG
PROTEIN sequence
Length: 161
MFKSLKRTKVEKYIIDNKDSFYRIAYSYTKNEEDALDVVQEAMYKALYSVENIKEVNYIKTWFYKILVRTSIDFIRKNRKYNNMTDIDLIDETGEYDKYTDLDLRRALEELPIEYKSIIILRFFEDLKIEEVAIILDENVNTVKTRLYTALKKLKLKIEE*