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L3_063_052G1_scaffold_508_20

Organism: L3_063_052G1_public_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 15
Location: comp(22383..24323)

Top 3 Functional Annotations

Value Algorithm Source
RNase E specificity factor CsrD n=2 Tax=Citrobacter RepID=R8V3N1_9ENTR similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 646.0
  • Bit_score: 1267
  • Evalue 0.0
RNase E specificity factor CsrD {ECO:0000313|EMBL:EOQ46061.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. KTE151.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 646.0
  • Bit_score: 1267
  • Evalue 0.0
regulatory protein CsrD similarity KEGG
DB: KEGG
  • Identity: 97.2
  • Coverage: 646.0
  • Bit_score: 1243
  • Evalue 0.0

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Taxonomy

Citrobacter sp. KTE151 → Citrobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1941
ATGCGATTAACGACGAAATTTTCAGCTTTTGTGACGCTGCTTACAGGGTTAACGATCTTCGTAACTCTGATCGGCTGCTCGCTGAGTTTCTATAACGCGATTCAATATAAGTTCACCACCCGTGTTCAGGCGGTGGCGACGGCGATTGATACGCACCTTGTCTCCCGCGATGTCGTTGCGCTAACCCCGCAAATCGATGAACTGATGGTTTCGGTTGATATCGTGCGCGTCGAACTGCTTCAGGGCGAACACGTGGTGTATGACCACTCCAGAACCAGCAGCTACCGCCCGGCGGGGACGAACAATCTGTATCGTGATGTCACCGTCCCGTTGGTCAAACACCCGGGCATGTCGCTGCGTCTGGTTTATCAGGATCCAATGGGCAACTATTTCCATTCGCTGATGACTACCGCGCCGCTCACGTTGGCGATTGCTTTCATTATACTGATGCTCTTTTTGTCTGTGCGCTGGCTTCAGCGTCAGCTTTCAGGTCAAGAGTTGCTGGAGATTCGTTCAACGCGCATTCTTAACGGCGAACGTGGACCGAACGTGCGGGGGACGGTCTATGAATGGCCTGCGCGTACCAGTAGCGCGCTCGATATGCTGCTGACCGAAATTCAAAGTGCCCGCGAGCAACGTAGCCGACTGGATACGCTGATTCGTTCCTATGTGGCGCAGGATACAAAAACCGGGCTAAGCAACCGCCTGTTCTTTGATAACCAACTGGCAACGCTGCTGGAAGATCAGGAAAAAGTGGGATCGCATGGCGTCGTGATGATGGTACGCCTGCCGGACTTTACGCTGCTGCGCGATAGCTGGGGAATTACCCTTGCGGAAGAACAAATTTCAACGCTAATCAATTTGTTGTCGACTTTTATGACGCGCTATCCGGGCGCGTTGCTGGCGCGCTACCACCGTAGCGATTTTGCCATCCTGTTGCCACACCGCACGCTGAAAGAGGCGGAAAGTATTGCCGGGCAATTATTAAAAGCGGTAGATGCGCTTCCGGCTAATAAAATGATCGACCGTGCCGATATGGTTCATATTGGCATTTGTGTTTGCCGCAGCGGTCAGTCGACGGAACAAGTGATGGATCACGCCGAAGCCGCCACGCGGAACTCGGTATTGCAGGGTGGGAACAGTTGGTCGGTCTATGATGACTCACTACCGGAAAAAGGTCGGGGTAACGTACGCTGGCGAACGCTGATCGAACAGATGCTCAGCCGGGGTGGACCCAGAATTTATCAAAAGCCTGCGGTAACCCGTGAAGGACGGGTGCACCACCGGGAGCTGATGTGCCGTATTTTTGATGGCAGCGAAGAGGTTATTTCGGCGGAATATATGCCGATGGTCCTGCAGTTTGGCCTGGCTGAAGAATATGACCGTCTGCAAATCAGCCGTCTGATCTTACTGTTGGGCTATTGGCCGCAGGAAAACCTGGCGATGCAGACAACGGTTGAATCGCTAATTCGCCCACGTTTTCAGCGCTGGCTACGTGATACGCTGATGCAGTGCGAAAAATCATTACGCAAACGCATAATTATTGAACTTGCTGAGGCAGATGTCTGTCAACATATCAGCCGGTTACAGCCCGTCATCAGATTGATGAATGCGCTGGGTGTGCGAATTGCCGTTACGCAGGCGGGTTTAACGCTGGTGAGCACCAGTTGGATCAAAGAGCTTAACGTTGAGTTATTGAAGCTGCATCCAAGCCTGGTGAGGAATATTGATAAGCGAACCGAAAACCAGCTCCTGGTGCAAAGCCTGGTGGAGGCTTGTTCTGGAACACCAACGCAGGTTTACGCCACGGGCGTTCGTTCGCGTAGCGAGTGGCATACGCTGACGGAACGCGGAGTTGCGGGTGGGCAAGGGGATTTTTTTGCCGCATCACAGCCACTTGACACTAACGTGAAAAAATATTCGCAAAGATACTCGGTTTAA
PROTEIN sequence
Length: 647
MRLTTKFSAFVTLLTGLTIFVTLIGCSLSFYNAIQYKFTTRVQAVATAIDTHLVSRDVVALTPQIDELMVSVDIVRVELLQGEHVVYDHSRTSSYRPAGTNNLYRDVTVPLVKHPGMSLRLVYQDPMGNYFHSLMTTAPLTLAIAFIILMLFLSVRWLQRQLSGQELLEIRSTRILNGERGPNVRGTVYEWPARTSSALDMLLTEIQSAREQRSRLDTLIRSYVAQDTKTGLSNRLFFDNQLATLLEDQEKVGSHGVVMMVRLPDFTLLRDSWGITLAEEQISTLINLLSTFMTRYPGALLARYHRSDFAILLPHRTLKEAESIAGQLLKAVDALPANKMIDRADMVHIGICVCRSGQSTEQVMDHAEAATRNSVLQGGNSWSVYDDSLPEKGRGNVRWRTLIEQMLSRGGPRIYQKPAVTREGRVHHRELMCRIFDGSEEVISAEYMPMVLQFGLAEEYDRLQISRLILLLGYWPQENLAMQTTVESLIRPRFQRWLRDTLMQCEKSLRKRIIIELAEADVCQHISRLQPVIRLMNALGVRIAVTQAGLTLVSTSWIKELNVELLKLHPSLVRNIDKRTENQLLVQSLVEACSGTPTQVYATGVRSRSEWHTLTERGVAGGQGDFFAASQPLDTNVKKYSQRYSV*