ggKbase home page

L3_063_368G1_scaffold_16323_2

Organism: L3_063_368G1_public_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 17
Location: comp(722..1174)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9Z144_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 76.7
  • Coverage: 150.0
  • Bit_score: 220
  • Evalue 9.00e-55
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:ENZ17973.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.7
  • Coverage: 150.0
  • Bit_score: 220
  • Evalue 1.30e-54
FliA/WhiG subfamily RNA polymerase sigma-28 subunit similarity KEGG
DB: KEGG
  • Identity: 49.7
  • Coverage: 149.0
  • Bit_score: 147
  • Evalue 1.60e-33

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

[Clostridium] clostridioforme → Lachnoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 453
ATGGCAAAGCCATATCGAATCCCGGATTACAGGAAACTGTACCCGGAGGCCAGCGAGGAAGTCATCGCTGTGCTGAAAACTACAGAAAGAAAAATGCAGTACCAGGAGTACGACCTCAAGGCGGAACAGGCCATTGTGGATCAGGATGGACAAACTGTCACCTTTATCCCCAGCCGTGAGGACTCCTATGAACGGCTGCTGGAGCAGGATGTATATTTTGTGGAAACCACCGACAGCATGGAAGAAACCGCAATCCGCAACATCCAGTCCCAGCAGCTACATAAAGCCTTATCCCTTCTCACTGATGATGAGCGTGACCTAATTGAACAGCTATTCTTTGAGGAACGCACGGAGCGTGATCTGGCAGTGGAATATGGACTGTCGCAGAGAGGAATCAATAAACGCAAACAGCGGATATTAAAGCATCTGCGTGAGCTGCTGAAAAAAATATAA
PROTEIN sequence
Length: 151
MAKPYRIPDYRKLYPEASEEVIAVLKTTERKMQYQEYDLKAEQAIVDQDGQTVTFIPSREDSYERLLEQDVYFVETTDSMEETAIRNIQSQQLHKALSLLTDDERDLIEQLFFEERTERDLAVEYGLSQRGINKRKQRILKHLRELLKKI*