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L3_068_000G1_public_UNK

In projects: L3_068_000G1_public

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 438.21 Longest contig: 459.14 Kbp Bin length: 125.75 Mbp GC content: 45.93 %
Contigs count: 26781 Features count: 135941 rRNAs count: 14 tRNAs count: 1507

Genome completeness

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 18
Displaying items 451-500 of 26781 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
L3_068_000G1_scaffold_15405
Species: Streptococcus phage 2972 (50%)
2 1712 bp 40.30 3.15 100.58
L3_068_000G1_scaffold_22243
Species: Escherichia coli (50%)
2 1199 bp 55.46 5.63 100.58
L3_068_000G1_scaffold_8405
Species: Clostridium sp. ASBs410 (50%)
4 2935 bp 45.25 3.58 100.58
L3_068_000G1_scaffold_15146
Species: Clostridium sp. SY8519 (50%)
2 1739 bp 45.14 3.02 100.57
L3_068_000G1_scaffold_12398
Species: [Clostridium] symbiosum (50%)
2 2094 bp 50.86 4.66 100.57
L3_068_000G1_scaffold_25486
Species: Peptoclostridium difficile (100%)
2 1050 bp 62.00 6.57 100.57
L3_068_000G1_scaffold_21704
Species: [Clostridium] bifermentans (50%)
2 1229 bp 31.57 5.74 100.57
L3_068_000G1_scaffold_18852
Species: Flavonifractor plautii (100%)
2 1408 bp 64.70 51.03 100.57
L3_068_000G1_scaffold_21656
Species: [Clostridium] saccharolyticum (50%)
2 1232 bp 42.86 6.94 100.57
L3_068_000G1_scaffold_16671
Species: Clostridium sp. 7_3_54FAA (50%)
2 1587 bp 49.65 4.82 100.57
L3_068_000G1_scaffold_13322
Species: [Eubacterium] siraeum (66.67%)
3 1954 bp 45.24 4.15 100.56
L3_068_000G1_scaffold_25017
Species: Clostridium sp. MSTE9 (100%)
2 1071 bp 41.18 4.20 100.56
L3_068_000G1_scaffold_24925
Species: [Clostridium] innocuum (50%)
2 1074 bp 49.53 4.75 100.56
L3_068_000G1_scaffold_21217
Species: Escherichia coli (100%)
2 1256 bp 51.83 29.86 100.56
L3_068_000G1_scaffold_13085
Species: Anaerostipes caccae (50%)
2 1987 bp 50.63 6.27 100.55
L3_068_000G1_scaffold_16190
Species: Hungatella hathewayi (100%)
2 1632 bp 54.17 3.22 100.55
L3_068_000G1_scaffold_8503
Species: Hungatella hathewayi (100%)
3 2903 bp 50.67 4.39 100.55
L3_068_000G1_scaffold_24584
Species: Clostridium sp. ASBs410 (50%)
2 1089 bp 43.62 4.68 100.55
L3_068_000G1_scaffold_4066
Species: [Clostridium] clostridioforme (100%)
6 5484 bp 35.21 7.03 100.55
L3_068_000G1_scaffold_20813
Species: Klebsiella oxytoca (100%)
2 1280 bp 61.25 54.84 100.55
L3_068_000G1_scaffold_20817
Species: Klebsiella oxytoca (100%)
2 1280 bp 60.55 128.55 100.55
L3_068_000G1_scaffold_14325
Species: Clostridiales bacterium 1_7_47FAA (100%)
2 1832 bp 51.36 6.06 100.55
L3_068_000G1_scaffold_11730 3 2205 bp 69.71 3.13 100.54
L3_068_000G1_scaffold_10622
Species: Hungatella hathewayi (100%)
2 2405 bp 55.30 3.87 100.54
L3_068_000G1_scaffold_17799
Species: Propionibacterium sp. HGH0353 (100%)
2 1489 bp 62.86 3.93 100.54
L3_068_000G1_scaffold_15707
Species: Corynebacterium pyruviciproducens (50%)
2 1680 bp 67.26 5.45 100.54
L3_068_000G1_scaffold_15679
Species: Peptoclostridium difficile (66.67%)
3 1683 bp 44.98 4.28 100.54
L3_068_000G1_scaffold_13972
Species: Hungatella hathewayi (100%)
2 1871 bp 50.40 5.69 100.53
L3_068_000G1_scaffold_23641
Genus: Streptococcus (100%)
3 1131 bp 42.88 2.92 100.53
L3_068_000G1_scaffold_23643
Species: Veillonella sp. DORA_A_3_16_22 (50%)
2 1131 bp 48.89 8.49 100.53
L3_068_000G1_scaffold_4613
Species: [Clostridium] symbiosum (100%)
6 4918 bp 53.36 5.55 100.53
L3_068_000G1_scaffold_17374
Species: Streptococcus sp. ACS2 (66.67%)
3 1525 bp 38.69 3.84 100.52
L3_068_000G1_scaffold_15360
Species: Hungatella hathewayi (100%)
2 1716 bp 52.86 4.02 100.52
L3_068_000G1_scaffold_23305
Species: Clostridium butyricum (50%)
2 1146 bp 31.06 4.71 100.52
L3_068_000G1_scaffold_19627
Species: human gut metagenome (100%)
2 1355 bp 28.49 2.66 100.52
L3_068_000G1_scaffold_13418
Species: Klebsiella oxytoca (100%)
2 1940 bp 52.84 51.03 100.52
L3_068_000G1_scaffold_13424
Species: Klebsiella oxytoca (100%)
2 1940 bp 53.71 108.79 100.52
L3_068_000G1_scaffold_14824
Species: [Clostridium] symbiosum (100%)
3 1776 bp 52.03 7.35 100.51
L3_068_000G1_scaffold_22530
Species: Bacteroides sp. 1_1_6 (100%)
2 1185 bp 35.36 5942.41 100.51
L3_068_000G1_scaffold_7602
Species: Escherichia coli (100%)
4 3191 bp 54.37 43.67 100.50
L3_068_000G1_scaffold_22275
Species: [Clostridium] innocuum (50%)
2 1197 bp 43.44 3.01 100.50
L3_068_000G1_scaffold_13000
Phylum: Firmicutes (66.67%)
3 2000 bp 40.15 4.50 100.50
L3_068_000G1_scaffold_26589
Species: Haemophilus parainfluenzae (100%)
2 1006 bp 40.26 2.09 100.50
L3_068_000G1_scaffold_26590
Species: Lachnospiraceae bacterium 9_1_43BFAA (50%)
2 1006 bp 47.81 3.28 100.50
L3_068_000G1_scaffold_18738
Species: [Clostridium] bolteae (50%)
2 1415 bp 45.30 6.78 100.50
L3_068_000G1_scaffold_11478
Species: Coprococcus sp. HPP0048 (100%)
2 2251 bp 42.16 5.86 100.49
L3_068_000G1_scaffold_18506
Species: Erysipelotrichaceae bacterium 3_1_53 (100%)
3 1433 bp 50.94 5.23 100.49
L3_068_000G1_scaffold_26054
Species: Clostridium butyricum (50%)
2 1027 bp 34.96 3.51 100.49
L3_068_000G1_scaffold_16011
Species: Escherichia coli (100%)
2 1648 bp 61.29 35.95 100.49
L3_068_000G1_scaffold_15896
Species: Staphylococcus phage SAP-2 (50%)
2 1660 bp 36.69 3.61 100.48
Displaying items 451-500 of 26781 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.