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L3_068_000M1_scaffold_119_2

Organism: L3_068_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 16
Location: comp(1572..5768)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 1398.0
  • Bit_score: 2780
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Akkermansia muciniphila (strain ATCC BAA-835) RepID=RPOC_AKKM8 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 1398.0
  • Bit_score: 2780
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 1398.0
  • Bit_score: 2780
  • Evalue 0.0

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Taxonomy

Akkermansia muciniphila → Akkermansia → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 4197
ATGTCTGACACCCCCACCATCAGGGAAATGCACGGCCTGAGCGACAAGCCCCGGACCTTTGACCAGGTTGCCATCACCGTGGCGGATCCGGATACCATCCGCAGCTGGTCATTCGGTGAAGTCGTCAACCCGGAAACCATCAACTACCGCACGTTCAAGCCGGAAAAAGGCGGCCTGTTCTGCGAACGCATCTTCGGGCCCACCCGAGACATGGAATGCGCCTGCGGCAAGTACAAGCGCATCAAGCATAAGGGCATCACCTGCGACCGCTGCGGCGTGGAAGTAACCAACGCGCGCGTGCGCCGCGAACGAATGGGCCATATTGAACTGGCCGTTCCGGTTTCCCATATCTGGTTTTACAAATGCATGCCCAGCCGCATTGGCCTTATGCTGGACATGACAGCCCGCCATTTGGAACGCGTGATTTACTATGAAGACTACATCGTGGTAGATCCCGGCAGTACCCCTCTGGAAAAGGGGGCCATCCTGACGGAAGAAGAATTCCGCAATGCGGAAGACGAATACGGCTATGACAGCTTTGAAGCCGGCATGGGCGCGGAAGCCATCCAGAAAATGCTGGCGGCCATTGATCTGCCCACCCTCGTCGCGGATCTTCAGGAACAGCTGGACAATACCAACTCCAAACAGAACAAGCGCAAGATTGCCAAGCGTCTGAAACTGGCCCAGGGGTTCCTTCAGTCCAACACACGCCCGGAATGGATGATTTTGAACGTTCTGCCCGTCATTCCTCCGGACCTGCGCCCGCTGGTTCCTCTGGAAGGCGGCCGTTTCGCAACGTCCGACCTGAATGACCTGTACCGCCGCGTCATCAACCGCAACAACCGCCTGAAAACCCTCTTGAGCCTCAAAACTCCAGAAGTCATCATCCGTAATGAAAAACGCATGCTTCAGGAAGCCGTGGATGCCCTGTTTGACAACGGCCGCCACGGCCGTGCCGTCACCGGCGCCGGCAACCGCCCCCTCAAATCCCTCTCCGACATGCTGAAGGGCAAGGGAGGCCGTTTCCGCCAGAACCTGCTCGGCAAGCGCGTGGACTACTCCGGCCGCTCCGTTATCGTCATCGGCCCGGAATTGAAACTCAACCAGTGCGGTCTTCCCAAGAAGATGGCGCTCATTCTGTTTGAACCCTTCATCATCCACCGTCTGAAAGAGCTGGGTTACGTGCACACGGTGCGCTCCGCCAAGAAGCTCATTGACCGCAAGACGCCGGAAGTGTGGGATATTCTGGAAGAAGTGACCAAGGGCCACCCGGTCATGCTCAACCGCGCGCCCACCCTGCACCGCCTCTCCATCCAGGCTTTTGAACCGGTTCTGATTGAAGGTTCCGCCATCCGTCTGCACCCGCTCGTCTGTAATGCGTACAACGCGGACTTCGACGGCGACCAGATGGCTGTGCACGTGCCTCTGTCCGTGGAAGCGCAGATGGAAGCCCGGCAGCTCATGCTGGCGCCCAACAATATTTTCTCCCCTGCTTCCGGCAAGCCCATTGCCACACCCACGCAGGACATCATTCTGGGCGCGTACTTCCTGACGCATACCCGTGCTGCGGAAGTACAGAACAATCAGGATAATCATCACCATCTTCCCCTCTTCGAATCCATTGACGAGGTGGAATACGCCATTGCCGCCCGCAAAATCGGCTACCATGACTGGATCCGCCTGCACAACCCGGACTACGGCAAAAAGCCTTCCGAAGTAGTGTATGGGGATGTCACCAAGAAGGTTATCATCACTACTGCCGGACGCGTGCGTTTCAATGAAATCTGGCCCCGGGAACTCGGTTACATTAACCGCAACGTAGGCAAGAAACAGATGGGCGACATCATCTGGCGCTGCTACCAGACCGTCGGCAAGGAACGTACCGTGCAGACTCTGGACGCCCTGAAAAACCTGGGCTTCAAGGAAGCAACCCGTTCCGGCTGCTCCATCGGCATCGTGGACATGGTGGTTCCCTCCCAGAAAAAGACGGAAATTGAAAAAGCCTATGCGGAGCTGGACAAGGTGACCCGCCAGTATAAGAACGGTATTATCACGGATGGGGAACGCTACCAGAAGGTGGTGGACATCTGGACCCAGACTACGGATGTCATCCAGGCGGCTCTGTACCGCAAGCTGGAACACAACGAAGGCTCCAAGATGGCCAGCCCGCTCTTCATGATGGTGGACTCCGGAGCCCGAGGCAACAAGGCGCAGATCAAGCAGCTCTCCGGCATGCGCGGTTTGATGGCGAAACCCAGCGGCGAAATTATCGAACGCCCCATCACGGCCAACTTCCGTGAAGGCCTTTCCGTGCTGGAATACTTCATCTCCACCCACGGCGCCCGCAAGGGTCTGGCAGATACCGCGCTGAAAACGGCGGACTCCGGCTACATGACCCGCAAACTCGTGGACGTGGCCCAGGATGTCATCGTCCATGCGGAAGATTGCGGCACCAGCAACGGCATCACCGTTCACGCCATCTATGACGGCGACGAAGAAGTGGCGTCCCTTTCCTCCCGTATCTACGGCCGGACTTCCTGCGAACGCATCGTTGACCCCGTCAGCGGCGAGGTTATCGTAGACATCAACGACCTCATTAACGAAAAGCAGGCGGAACAACTGGAAAAAATCGGCATTGAACGGCTGAAAATCCGCTCCGTACTCACCTGCGAACTCAAAAAGGGCTGCTGTGCCAAGTGCTACGGCCTGAACCTGGCCACCGGACAGGAAGTGAAGATCGGGGAAGCGGTCGGCATTATTGCCGCCCAGTCCATCGGCGAACCCGGCACGCAGCTCACCATGCGTACGTTCCACGTGGGCGGAACGGCTACCACGGCGTTCAAGCAGCCCATCGTGAAAGCCAAGAACGACGGCCGCGTCATCTACACGGAAGATCTCCGCACGGTGGAAAACGCAGACGGCAACTTCGTCGTCCTGAATAAAAACTGCTCTGTCCGCATCGAAAACGAACAGGGCCGCGAACTGGAATCCTACCAGCCCGTCATCGGCACCATCCTGTACGTGCCCAACGGCGGCACTATCAAGAAGGATGAAACCCTCGCCACCTGGGATCCGTACAATGTGCCCGTGATTGCAGAAAAGGGCGGCATCGTCGAATTCAAGGATATGATCGTCGGCATCACCGTTTCCAAGGAAACGGACCGGGAAACCGGTGCCTCCTCCCTTGTCGTGATGGAACACAAGCAGGAACTTCACCCGCAGGTGGTCATCCGCGATGCCAAGACCCGCGAAGTTCTGGCTCATCATGCCATTCCCGCAGGCGCCAACCTCACTGTGAAGGACGGAGAAACCATCTCCGCCGGCACAATGGTGGCCAAGACGCCCCGCAAGGTAGCCAAGACGAAGGACATCACCGGCGGTCTGCCCCGCGTGGCGGAATTGTTCGAAGCCCGCAAACCCAAGGACGCCTGCACCATTGCACGCGTGGAAGGCATTGTGCGCCTCAGCAGCAAGAATACTTCCCGCGGCAAGAAGGTCATTACCATTGAAACACCCACGGGCGAACTGGTGGACCATCTGGTCCCGATGAACAAGCACGTCATCGTTCATGAAGACGACCACGTGCATCTGGGCGACCAGCTTACGGAAGGCCCCGTTTCTCCGGAAGAAATTCTGGATGTCTGCGGCAAGGAACGTCTCCAGGAACACCTCGTTAACGAAGTTCAGGAAGTGTACCGCCTCCAGGGGGTGGAAATCAACGACAAGCATGTGGAAATCATCGTGCGCCAGATGCTCCGCAAGGTAGTCATCACGGAACCCGGAAATACCGAATTCCTGTGGGGAGACCAAGTGGACAAGACCACGTTCGACCGCATCAATGAACAAACCGTAGCCCAGGGCGGCCAACCGGCCGCAGCCAAGCCCGTTCTGCTCGGTATCACGAAGGCCTCCCTGGAAACGGAATCCTTCATTTCCGCGGCATCTTTCCAGGATACCACACGCGTTCTGACGGAAGCATCCACCCTCGGCAAGACCGATACTCTGGAAGGCTTCAAGGAAAACGTCATCATGGGCCACCTCATTCCCGCCGGCACCGGATTCTCCCGTTACAGCAAGATTGAAGTGGAACCTGCAGAGGGCGCAGAAGAAATCGCGGCGGCCAGCGAAGAAGAGGAAGCGGCGGAACTTGCCGAAGACATGTTGAACGATACCATCAACTTCGACAACGAACGCTAA
PROTEIN sequence
Length: 1399
MSDTPTIREMHGLSDKPRTFDQVAITVADPDTIRSWSFGEVVNPETINYRTFKPEKGGLFCERIFGPTRDMECACGKYKRIKHKGITCDRCGVEVTNARVRRERMGHIELAVPVSHIWFYKCMPSRIGLMLDMTARHLERVIYYEDYIVVDPGSTPLEKGAILTEEEFRNAEDEYGYDSFEAGMGAEAIQKMLAAIDLPTLVADLQEQLDNTNSKQNKRKIAKRLKLAQGFLQSNTRPEWMILNVLPVIPPDLRPLVPLEGGRFATSDLNDLYRRVINRNNRLKTLLSLKTPEVIIRNEKRMLQEAVDALFDNGRHGRAVTGAGNRPLKSLSDMLKGKGGRFRQNLLGKRVDYSGRSVIVIGPELKLNQCGLPKKMALILFEPFIIHRLKELGYVHTVRSAKKLIDRKTPEVWDILEEVTKGHPVMLNRAPTLHRLSIQAFEPVLIEGSAIRLHPLVCNAYNADFDGDQMAVHVPLSVEAQMEARQLMLAPNNIFSPASGKPIATPTQDIILGAYFLTHTRAAEVQNNQDNHHHLPLFESIDEVEYAIAARKIGYHDWIRLHNPDYGKKPSEVVYGDVTKKVIITTAGRVRFNEIWPRELGYINRNVGKKQMGDIIWRCYQTVGKERTVQTLDALKNLGFKEATRSGCSIGIVDMVVPSQKKTEIEKAYAELDKVTRQYKNGIITDGERYQKVVDIWTQTTDVIQAALYRKLEHNEGSKMASPLFMMVDSGARGNKAQIKQLSGMRGLMAKPSGEIIERPITANFREGLSVLEYFISTHGARKGLADTALKTADSGYMTRKLVDVAQDVIVHAEDCGTSNGITVHAIYDGDEEVASLSSRIYGRTSCERIVDPVSGEVIVDINDLINEKQAEQLEKIGIERLKIRSVLTCELKKGCCAKCYGLNLATGQEVKIGEAVGIIAAQSIGEPGTQLTMRTFHVGGTATTAFKQPIVKAKNDGRVIYTEDLRTVENADGNFVVLNKNCSVRIENEQGRELESYQPVIGTILYVPNGGTIKKDETLATWDPYNVPVIAEKGGIVEFKDMIVGITVSKETDRETGASSLVVMEHKQELHPQVVIRDAKTREVLAHHAIPAGANLTVKDGETISAGTMVAKTPRKVAKTKDITGGLPRVAELFEARKPKDACTIARVEGIVRLSSKNTSRGKKVITIETPTGELVDHLVPMNKHVIVHEDDHVHLGDQLTEGPVSPEEILDVCGKERLQEHLVNEVQEVYRLQGVEINDKHVEIIVRQMLRKVVITEPGNTEFLWGDQVDKTTFDRINEQTVAQGGQPAAAKPVLLGITKASLETESFISAASFQDTTRVLTEASTLGKTDTLEGFKENVIMGHLIPAGTGFSRYSKIEVEPAEGAEEIAAASEEEEAAELAEDMLNDTINFDNER*