ggKbase home page

L3_068_368G1_scaffold_7119_2

Organism: L3_068_368G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 15
Location: comp(387..2054)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-54 interaction domain protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SSU0_CLOSY similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 555.0
  • Bit_score: 1098
  • Evalue 0.0
Fis family Sigma54 specific transcriptional regulator {ECO:0000313|EMBL:EGA92480.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 555.0
  • Bit_score: 1097
  • Evalue 0.0
sigma-54 dependent trancsriptional regulator similarity KEGG
DB: KEGG
  • Identity: 55.5
  • Coverage: 555.0
  • Bit_score: 617
  • Evalue 3.40e-174

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

[Clostridium] symbiosum → Lachnoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1668
GCCGGAACAGGTATTTTTGAGCAGCATGTCAATGAAGATATGGCTCAGGAGGGGTATGTCTATGAGCATCTGCTTCGTACCGGCAATGTGGAAATTATATATAATCCGGGCAAAGAAAGACTTTGCCAGAAATGTCCTAAAATGGATATCTGCAATGAAGAGATAGAGATTTCAATGCCCATCCGGCTGGGAGGGGAGATTATCGGAGTTATTGGCCTGGTGGGGAGTACCCCGGAGCAGAAAGAGCGCGTCCTTTCGAATGAGAAGATGTATCTTGATTTGCTGGCACAGATTGCGGAGTTCATTGCGGTGAAAGCGGGAGAACTGACGGAATCTAAGAAGCGGGCGGTTCTGCTTGACGCTCTGGACTGCGTGATCAATCATGTGGAGAAGGGGATTTTGATTTTAGGCGGGGATAATGTAGTTACTATGGCAAACGAACCGGCTAAACGGCAGCTTTCAGTCGATATGCCGGAAGGGCAGATGGCAGTAGTTACACCGACGGGAGATAATTTCAGCCGCCAGAATGAGTACAAAATTCTGTTGAATGGTAAAGAGTATTTTGTCATGGGACATCTCTATGATTTGGACCAGGATCCGAGGCGTTACTCAAAAGTACTGATATTTGAGAGTACCAGAGAGATGCAGGAGCGCTTTTACGAGATAACGAATACGGTGAATCCGCTCAGCACCTTTAATATAATCGGAACCAGTCCTCAAACCCGGCAGATGCAGGAGGAGATTAAGAAGATTGCCAGGAGTACCTCCACGGTTCTGATTACAGGCGAGAGCGGAACAGGAAAAGAACTGGTGGCGACTGCCATCTGGAAGGCCAGCGACAGGAGAGATAACCGCTTTATTGCAATCAACTGCGGCGCGATACCGGAGCCTCTTCTGGAATCGGAGCTTTTCGGCTATGTCAAAGGGGCGTTTACCGGGGCGGATCCGAATGGCAGGATGGGTAAATTTGAACTGGCTAACAAAGGGGTTATCTTTTTGGATGAGATAGGGGATATGCCCCTGTATCTTCAGGTCAAGCTGCTGCGGGTGATTCAGGAGCGGAAAATAACCCGTATTGGTTCCAACCAGGTAATTCCGATTGATGTAAGAATTATCGCTGCGACGAACAAAGATTTGAAAGAGATGATGTACAATAATAAATTCAGGGAGGATTTATACTACCGTTTGAATGTTATCCCGCTGAAGATTGCACCGTTGAGGGAGCGCCGTGAGGATATCAGGGAGCTGGTGTATTATTTTGCAAAGCGCTATGCCAGCCTTTTTGGGAAAAATCTTCAGAAGATTTCAGAAGAGACGATGGAACATCTTTATGAGTATCCGTGGTATGGCAATATCCGGGAACTGGAAAATACGGTTGAGTTTATGATTAATATGATGGAGGAGGACGGTGTTCTTAACATGGGAACCCTCCCGGCCAACATATCGGAGCCGCAGCCCGGTGTCGGGAAAACGGGTGCAAGCGGCACAGTAGTCACGGATATGGTGACACCTCTCAGGGAACTGGAACGCTCTGAGATAGCGAAGGCGATCCGCATTTACGGCAATGATACCGAAGGAAAAAAACAGGCGGCAAAGAAACTGGGAATTGGACTGGCAACTTTATACCGCAAAATGGAGGGTACAGATGATACGGCTGGCAAAAGATAA
PROTEIN sequence
Length: 556
AGTGIFEQHVNEDMAQEGYVYEHLLRTGNVEIIYNPGKERLCQKCPKMDICNEEIEISMPIRLGGEIIGVIGLVGSTPEQKERVLSNEKMYLDLLAQIAEFIAVKAGELTESKKRAVLLDALDCVINHVEKGILILGGDNVVTMANEPAKRQLSVDMPEGQMAVVTPTGDNFSRQNEYKILLNGKEYFVMGHLYDLDQDPRRYSKVLIFESTREMQERFYEITNTVNPLSTFNIIGTSPQTRQMQEEIKKIARSTSTVLITGESGTGKELVATAIWKASDRRDNRFIAINCGAIPEPLLESELFGYVKGAFTGADPNGRMGKFELANKGVIFLDEIGDMPLYLQVKLLRVIQERKITRIGSNQVIPIDVRIIAATNKDLKEMMYNNKFREDLYYRLNVIPLKIAPLRERREDIRELVYYFAKRYASLFGKNLQKISEETMEHLYEYPWYGNIRELENTVEFMINMMEEDGVLNMGTLPANISEPQPGVGKTGASGTVVTDMVTPLRELERSEIAKAIRIYGNDTEGKKQAAKKLGIGLATLYRKMEGTDDTAGKR*