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L3_069_000G1_scaffold_21

Search features with annotation key words

Displaying items 211-223 of 223 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_000G1_scaffold_21_211
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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240693..241745
DNA (1053bp) protein (351aa)
Site-specific recombinase XerD n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z4D3_9CLOT
Site-specific recombinase XerD {ECO:0000313|EMBL:CDD41045.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Site-specific recombinase XerD
L3_069_000G1_scaffold_21_212
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(241773..242180)
DNA (408bp) protein (136aa)
LysM domain n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZC69_9CLOT
LysM domain {ECO:0000313|EMBL:CDD41044.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
LysM domain.
L3_069_000G1_scaffold_21_213
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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242405..243022
DNA (618bp) protein (206aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008101}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008054};; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
SOS-response transcriptional repressor, LexA (EC:3.4.21.88)
LexA repressor n=1 Tax=Clostridium sp. CAG:299 RepID=R6YY88_9CLOT
L3_069_000G1_scaffold_21_214
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(243260..243613)
DNA (354bp) protein (118aa)
Ribosomal silencing factor RsfS n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZB75_9CLOT
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
iojap-related protein
L3_069_000G1_scaffold_21_215
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(243622..244227)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R7AUH4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD45617.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
conserved hypothetical protein TIGR00488
L3_069_000G1_scaffold_21_216
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(244261..244881)
DNA (621bp) protein (207aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZX11_9CLOT
L3_069_000G1_scaffold_21_217
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(244913..245206)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZHN0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD45615.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
conserved hypothetical protein TIGR00253
L3_069_000G1_scaffold_21_218
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(245220..246512)
DNA (1293bp) protein (431aa)
GTPase Obg n=2 Tax=Clostridium RepID=D6DJT8_CLOSC
Obg family GTPase CgtA
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_069_000G1_scaffold_21_219
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(246598..246888)
DNA (291bp) protein (97aa)
50S ribosomal protein L27 n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZIC2_9CLOT
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
LSU ribosomal protein L27P
L3_069_000G1_scaffold_21_220
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(247228..247536)
DNA (309bp) protein (103aa)
50S ribosomal protein L21 n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZQ59_9CLOT
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
LSU ribosomal protein L21P
L3_069_000G1_scaffold_21_221
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(247687..248919)
DNA (1233bp) protein (411aa)
S1 RNA binding domain protein n=1 Tax=Clostridium sp. CAG:299 RepID=R7AKR2_9CLOT
S1 RNA binding domain protein {ECO:0000313|EMBL:CDD43172.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
RNA-binding protein AU-1/Ribonuclease E/G
L3_069_000G1_scaffold_21_222
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(248900..249670)
DNA (771bp) protein (257aa)
Radical SAM-linked protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z4E9_9CLOT
Radical SAM-linked protein {ECO:0000313|EMBL:CDD43173.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L3_069_000G1_scaffold_21_223
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(249654..251516)
DNA (1863bp) protein (621aa)
Fe-S oxidoreductase n=2 Tax=Clostridium RepID=D6DJT2_CLOSC
Fe-S oxidoreductase
Radical SAM domain protein {ECO:0000313|EMBL:EFE11673.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
Displaying items 211-223 of 223 in total

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