ggKbase home page

L3_072_000G1_scaffold_133_13

Organism: L3_072_000G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 16
Location: 10887..11777

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1423799 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius DSM 20555 = ATCC 11741.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 296.0
  • Bit_score: 598
  • Evalue 4.40e-168
rluD; ribosomal large subunit pseudouridine synthase D (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 97.3
  • Coverage: 296.0
  • Bit_score: 587
  • Evalue 1.60e-165
Pseudouridine synthase n=1 Tax=Lactobacillus salivarius ATCC 11741 RepID=C2EH75_9LACO similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 296.0
  • Bit_score: 598
  • Evalue 3.10e-168

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lactobacillus salivarius → Lactobacillus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 891
ATGAAATTTACGTGGAATAAAGAAAGTGACGAGAAAATGACACTCAAAAAATTTTTAAAGAATAAGGGTGTCAGTCATCGAACTTTAAGTAGTTTGAAAAAAGGAAATGGAAAAGTTTTAGTAGATGGCAAAAAAAGGTCATTATCTATTGAAGTTGGTAAAGGAAAAATAACTTTGATTTTACCACCAGAAAAATCAGATGAAAATGTCAAAATAAGTAAAGAACCGCTAGATATTATTTATGAGGATAGCAATTGGCTAGTGGTAGATAAACCACCATTACTTTCAAGTGTTCCAGGTCCTAGTAATCGTACCGATACCTTAGTTAATCGGGTTAAATTTCATCTATGGCAACAAAAATCAAAAGACTTAGTTCCGCATGTAATTACTCGTTTAGATAGAGATACAAGTGGCTTAGTTCTTGTAGCTAAGCATCGTTTTGCTCAAGGATTGATTAACAAACAGGTTGAAGAACATAGTATAGATAAAAGATACTTGGCAGTGGTCGAAGGAATTATTGCAGAAAAGCATGGCATAATAGATAAACCACTTGGACCTAGAGAAAATGGAATCGGACAAATGGTAACTGATACAGGAAAGATTGCCAAAACTGAGTACTGGGTTAGAGAATACTTAGGAGATAAAGCTACTTTAGTTGAATGTAAGCTACATACAGGTAGAACGCATCAAATAAGAGCTCACTTCAGTAGTATTAATCATGCTTTGATAGGCGATAAGCTATATGGTGGCAGATTAGATTGGGGATTAGAAAGACAGGCACTCCATGCATATCAGTTAGCTTATGTAGATCCATTTACTCAAGAAGAAAAGTTATTTAAAAGTAAGATGCCAAAAGATTTAGAAAATTTGATAGTTAAATTTAAAAATTAA
PROTEIN sequence
Length: 297
MKFTWNKESDEKMTLKKFLKNKGVSHRTLSSLKKGNGKVLVDGKKRSLSIEVGKGKITLILPPEKSDENVKISKEPLDIIYEDSNWLVVDKPPLLSSVPGPSNRTDTLVNRVKFHLWQQKSKDLVPHVITRLDRDTSGLVLVAKHRFAQGLINKQVEEHSIDKRYLAVVEGIIAEKHGIIDKPLGPRENGIGQMVTDTGKIAKTEYWVREYLGDKATLVECKLHTGRTHQIRAHFSSINHALIGDKLYGGRLDWGLERQALHAYQLAYVDPFTQEEKLFKSKMPKDLENLIVKFKN*