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L3_072_000M1_scaffold_1020_22

Organism: L3_072_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 25 / 38 MC: 20
Location: comp(23869..27273)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.8
  • Coverage: 1137.0
  • Bit_score: 1851
  • Evalue 0.0
Transcription-repair-coupling factor n=2 Tax=root RepID=D1PBG1_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 80.8
  • Coverage: 1137.0
  • Bit_score: 1851
  • Evalue 0.0
transcription-repair coupling factor Mfd similarity KEGG
DB: KEGG
  • Identity: 68.0
  • Coverage: 1164.0
  • Bit_score: 1595
  • Evalue 0.0

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Taxonomy

Prevotella copri → Prevotella → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3405
ATGACTATTCAGGAAATAGAACAATTATATGGGCGTTCGCCACAGGCGAATGCCTTTTTGAGTTTATTGGAAGAAAAGTCGGTTCGTTCGGTTTTTCTCCAGGGCTTATTGTGTTCGTCGGTCCCTATGTTTTTTGCTCCTTTGCAGGAAAAGATGGATCGAACCGTACTGTTTGTGCTCAATGATGCAGATGAAGCCGGCTATTTTTATCACGATCTTACGCAGATGATGGGGCAGGAAAATGCGTTCTTCTTTCCATCCAGCTATCGCCGTGCCATCAAGTATGGACAGCGGGATGCGGCTAGCGAAATCCTGCGAACAGAAGTTCTTGCCAGATTGTCATCGGAATCATCTTCTGCTTCTGGCGGTATTTATATCGTTTCTTATCCTGCAGCACTTGCGGAAATGGTAGTTGGTAAGCAGCAGCTTGATGATCGTATCCTTAGATTGCAGGTAGGGCAGCAGGTCTCGCTTACAGACGTGGTTCATACCTTGCGTGATTTCGAACTCGTAGAGACCGATTATGTCTATGAACCGGGTCAGTTTGCCGTTCGTGGTAGTATCCTCGATGTCTATTCGTACAGTTGCGAATATCCATTCCGTGTAGACTTCTTCGGAGATGAAATAGACACCATCCGTACGTTCGATGTTGAAAATCAGTTGTCTAAAGACAAGCGGGAGCGTATTGAGATTGTGCCGGAGTTGGCGAGTGTTCAGTCTGTAAAACAGTCTTTCCTCAGTTTCCTTCCTTCTGATGCTCTTGTGGTGATGAAGGATTATACTTTTGTGCATGACAGTATCGAAAAGATTTATGAGGATGGCTTCTCTGCCCAAATCATGCAGGAACGGCTAGAGGGAGCCAACGAGATGGAAGCTGAGAAAATCATGCATGAGATGAAGAAGGAATTCAATCTCGTAACTCCTCTGGAATTCCAGAAAGGAGTGGCTGAGCACCAAAGAGTAGTGTTATCCGGTAGTGCAGATTCTTCTATCAGCTTTCAGATTGCACCACAGCCGCTCTTTCATAAGAATTTTGAACTTTTGACCAAGACTTTGGAGGATTATCAGCTTCAGGGGTACACCTTATTTATATTAGCTGATAGTCAGAAACAGCAACAGCGACTCAAGGATATCTTCAGCAGTGAGGAACTGAAGCGATACAACATCAGTTTTACATCTGTGGACAAGACTATCCACGAGGGCTTTATCGATCACGACAAGAAATGCTGTTTCTTTACCGATCATCAGATTTTCGACCGATTCCATAAGTATAACCTCCGTTCGGATAAGGCAAGGGCAGGAAAGATGGCACTTACCATGAAAGAACTGCAGGAAATGGAACCGGGGGATTTTATCGTGCATGTGGACTTTGGTATCGGTAAGTTTGGCGGACTGGTACGTGTTCCTACTGGTAATAGCTATCAGGAAGTAATCCGCATTATCTATAAGAATAATGATAAGGTGGATGTCTCAATCCATTCGCTTTATAAGATAAGCAAGTATCGTAGAAGTGATACGGGTGAACCGCCTCGTCTGTCTACGCTGGGTACTGGTGCCTGGGACAGACTGAAGGAAAAGGCAAAGAAGAAGATTAAGGATATAGCCCGAGATCTGATAAAGCTCTATGCGCAGCGCAGGAGAGAAAAGGGCTTTGCCTATAGTGCCGACAGTTATCTACAGCATGAATTGGAAGCGTCTTTCCTTTATGAGGATACCCCCGATCAGGGAAAGGCTACAGCTGAGGTGAAGAAAGACATGGAGAGTGGCAGACCTATGGATCGTCTGGTTTGTGGCGATGTTGGCTTCGGAAAGACGGAGGTTGCCATACGAGCAGCTTTTAAGGCGGCTTGCGACAGTAAGCAGGTGGCTGTACTGGTGCCTACCACCGTGTTGGCTTATCAGCATTACCAAACCTTTAAAAGTCGATTGGAAGGTCTTCCGGTACGTGTAGATTACCTCTCTCGTGCCCGTTCTGCCAAGGATACCAGACTGATTATCGAAGATTTGAAGGCAGGCAAGATAGATATACTTGTAGGAACCCATAAATTGATATCCAAAACGGTGAAATGGCACGACTTGGGTCTGCTGATCATTGACGAAGAGCAGAAGTTTGGTGTTTCAACCAAAGAAAAGCTGCGCCAGCTCAAGGTGAATGTTGATACGTTGACCATGAGTGCTACTCCAATACCTCGTACCTTGCAGTTCTCGCTGATGGGAGCGCGTGATATGAGTATCATGCGTACACCGCCACCTAACCGTTATCCTATCCATACCGAGTTGATTACTTTTAACCGTGAGGCGATTATTGATGCAGTCAACTTTGAAATGAGCCGTAATGGACAGGTATATTTCGTTTGCAATCGTATATCCAAGTTGGAGGAACTGAAACTCTTCCTGGAGAAACATATTCCAGATTGTCGTGTGGTCATCGGCCATGGTCAGATGGCACCAGAGCAATTGGAGAAAGTTATAATGGGATTCATCAATTATGATTATGACGTATTGCTTTCTACTACTATTGTAGAAAACGGAATAGATGTGGGTAATGCCAATACTATCATCATAGAAGATGCTCATAAGTTCGGACTGAGTGATTTGCATCAGATGCGTGGTCGTGTAGGACGTAGCAATAAAAAGGCATTTTGCTATCTTATTGCTCCTCCAAAGAGTGCGCTTACTCCAGAGGCACGTCGCAGACTGGAGGCGCTGGAAACTTTCAGTGAGCTGGGAAGTGGTTTTAATCTGGCTATGCAGGATCTGGATATTCGTGGTGCAGGTAATCTGTTGGGTTCGGAACAGAGTGGATTTATGGAAGATCTGGGTTATGAAACCTATCAGAAGATTCTTTCGCAGGCTGTAACAGAATTGAAGAACGAAGAGTTCTCTGACCTCTATCAGCAGGAAATGGAGGCTGGTGAGCAATTTACAGGAGATGATTTTGTAGACGACTGTGCGATAGAAAGTGACTTGGAGACCTATTTCCCTGATACCTATGTACCGGGCAGCAGCGAACGTATGCTTCTGTATCGTGAGTTAGATCATCTGCAGAGTGATGATGAGTTGAAGGCTTACCGACAGCGTTTGATAGACCGCTTTGGTCCGGTTCCGAAAGAAGGCGAAGAATTGATGCATGTTGTAACTCTTCGTCGTCTTGGAAAGCGTTTGGGAGCAGAGAAGATAATGCTCAAGACAGGAAGTATGCAGATGCAATTTGTGAGCAATGTTAACAGTCCTTTTTATAAGAGCCAAATGTTCTCTCGTGTGATTAATTATGTTACAACCCATGTTCGGGAGTGCGCATTGAAGGAGAAAAATAACAAGCGTTATCTGCGCATTAAGGATGTAACAAGCGTAGAACAAGCTGTAGAGCTATTGCGGAAAATATCATCCTTGGAATTGAAATAA
PROTEIN sequence
Length: 1135
MTIQEIEQLYGRSPQANAFLSLLEEKSVRSVFLQGLLCSSVPMFFAPLQEKMDRTVLFVLNDADEAGYFYHDLTQMMGQENAFFFPSSYRRAIKYGQRDAASEILRTEVLARLSSESSSASGGIYIVSYPAALAEMVVGKQQLDDRILRLQVGQQVSLTDVVHTLRDFELVETDYVYEPGQFAVRGSILDVYSYSCEYPFRVDFFGDEIDTIRTFDVENQLSKDKRERIEIVPELASVQSVKQSFLSFLPSDALVVMKDYTFVHDSIEKIYEDGFSAQIMQERLEGANEMEAEKIMHEMKKEFNLVTPLEFQKGVAEHQRVVLSGSADSSISFQIAPQPLFHKNFELLTKTLEDYQLQGYTLFILADSQKQQQRLKDIFSSEELKRYNISFTSVDKTIHEGFIDHDKKCCFFTDHQIFDRFHKYNLRSDKARAGKMALTMKELQEMEPGDFIVHVDFGIGKFGGLVRVPTGNSYQEVIRIIYKNNDKVDVSIHSLYKISKYRRSDTGEPPRLSTLGTGAWDRLKEKAKKKIKDIARDLIKLYAQRRREKGFAYSADSYLQHELEASFLYEDTPDQGKATAEVKKDMESGRPMDRLVCGDVGFGKTEVAIRAAFKAACDSKQVAVLVPTTVLAYQHYQTFKSRLEGLPVRVDYLSRARSAKDTRLIIEDLKAGKIDILVGTHKLISKTVKWHDLGLLIIDEEQKFGVSTKEKLRQLKVNVDTLTMSATPIPRTLQFSLMGARDMSIMRTPPPNRYPIHTELITFNREAIIDAVNFEMSRNGQVYFVCNRISKLEELKLFLEKHIPDCRVVIGHGQMAPEQLEKVIMGFINYDYDVLLSTTIVENGIDVGNANTIIIEDAHKFGLSDLHQMRGRVGRSNKKAFCYLIAPPKSALTPEARRRLEALETFSELGSGFNLAMQDLDIRGAGNLLGSEQSGFMEDLGYETYQKILSQAVTELKNEEFSDLYQQEMEAGEQFTGDDFVDDCAIESDLETYFPDTYVPGSSERMLLYRELDHLQSDDELKAYRQRLIDRFGPVPKEGEELMHVVTLRRLGKRLGAEKIMLKTGSMQMQFVSNVNSPFYKSQMFSRVINYVTTHVRECALKEKNNKRYLRIKDVTSVEQAVELLRKISSLELK*