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L3_072_000M1_scaffold_60766_1

Organism: L3_072_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 25 / 38 MC: 20
Location: comp(2..460)

Top 3 Functional Annotations

Value Algorithm Source
sigH; RNA polymerase factor sigma-70 (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 52.6
  • Coverage: 152.0
  • Bit_score: 162
  • Evalue 8.40e-38
RNA polymerase sigma-H factor n=1 Tax=Clostridium sp. CAG:245 RepID=R6C1D5_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 79.1
  • Coverage: 153.0
  • Bit_score: 256
  • Evalue 8.80e-66
RNA polymerase sigma-H factor {ECO:0000313|EMBL:CDA59257.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.1
  • Coverage: 153.0
  • Bit_score: 256
  • Evalue 1.20e-65

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Taxonomy

Clostridium sp. CAG:245 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 459
ATGAACAACAAATACGATAATATGACTGATGAAGAAATATTAGAATTAATAAAATCAAAAGACGAAGAAGCCCTAGAATATTTAATTTGCAAATACAAAGATGTTGTTAATTCAAAAGTAAACAAATACTTCATAATAGGTGCAGAAAAAGAAGACATCATACAAGAAGGACTAATTGGATTATACAAAGCAATAAAAGATTTTAATGCAACAAAGCAAAACACTTTCAAATCATTTGCAAACTTATGTATCGAAAGGCAACTAATTACGGCAATAAAATCTTCAAACAGACAAAAACACATTCCATTAAATTCATATCTATCTTTAAATATGAATGCTTATGAAAATGAGGACGGAAACAATGACACAGAAGTTATGGATGTATTTGATGCCAATGTTGTTGAAGATCCACTTGATACAATAACAAAAAAAGAATACATGACGAATGTGGAAAATGTT
PROTEIN sequence
Length: 153
MNNKYDNMTDEEILELIKSKDEEALEYLICKYKDVVNSKVNKYFIIGAEKEDIIQEGLIGLYKAIKDFNATKQNTFKSFANLCIERQLITAIKSSNRQKHIPLNSYLSLNMNAYENEDGNNDTEVMDVFDANVVEDPLDTITKKEYMTNVENV