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L3_072_000M1_scaffold_54870_1

Organism: L3_072_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 25 / 38 MC: 20
Location: 1..555

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1262823 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:575.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.2
  • Coverage: 170.0
  • Bit_score: 204
  • Evalue 1.10e-49
Transcription-repair-coupling factor n=1 Tax=Clostridium sp. CAG:575 RepID=R6I137_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 58.2
  • Coverage: 170.0
  • Bit_score: 204
  • Evalue 8.20e-50
transcription-repair coupling factor Mfd similarity KEGG
DB: KEGG
  • Identity: 25.6
  • Coverage: 176.0
  • Bit_score: 81
  • Evalue 2.30e-13

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Taxonomy

Clostridium sp. CAG:575 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 555
GCAAACGATGAACAAGAAGAAATAATAGAACAAGATATAGAACAAATAAAAGCAGGAAACTATATAAGCAAAATAGACAAATATTTTGACTGTTTTTATGACAAACAAGAAACAATAATAGACTACCTAAACACAAACAGTATAATAACATTTGACGAAATAAGAAAAATTGAACAAAGAGCACAAAACATAATAAAAGACAATGAACAACTAATAAAGAATCTAATAGAAAAAGGAAAAGTAGTACCACAAGCAATAAGCAATATACAAACATTTAGTAGTATTGAAAACAACACAAAAGAAAGCGAAAAAACAATAATATACATAGAAAAGCAAGACACCAAAATAGAAAGACAAGCACAAAACTACAACTTCCAATATAGAGCAATAAACTACTATAAGAGTGAAATAGAAACACTATTTACAGACATAAAAAAAGCACAAGAAAAAGGAAAAAATATATATGTAGTAGTAGCCACAAAAGAAAAAGCAAAAAAATTACAAGAAATACTAGAACAAGGGCAACAAGCCGTTCACGATCAAAACATGGACTGA
PROTEIN sequence
Length: 185
ANDEQEEIIEQDIEQIKAGNYISKIDKYFDCFYDKQETIIDYLNTNSIITFDEIRKIEQRAQNIIKDNEQLIKNLIEKGKVVPQAISNIQTFSSIENNTKESEKTIIYIEKQDTKIERQAQNYNFQYRAINYYKSEIETLFTDIKKAQEKGKNIYVVVATKEKAKKLQEILEQGQQAVHDQNMD*