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L3_072_057G1_scaffold_1353_1

Organism: L3_072_057G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: 240..887

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase sigma factor n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RNQ4_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 215.0
  • Bit_score: 428
  • Evalue 3.10e-117
Putative RNA polymerase sigma factor {ECO:0000313|EMBL:EDT16803.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 215.0
  • Bit_score: 427
  • Evalue 9.70e-117
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 99.1
  • Coverage: 215.0
  • Bit_score: 426
  • Evalue 2.60e-117

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 648
ATGGCAGAAAAGAAGCAAAGATTTATTAATAAGACTGCTAGGGAACTTAGACTTTTAGGGGAAAAGGGAAATAAGGAAGCTTTAAATGAGTTAATTATTAGGGGTAAAAAGGGTGATAAGTGTGCTATGGCTGAGATTGTTTCTATTTATGAAGGGTTAATTCATAAATACTCTACTAGGTTTTTTATTAATGGTTATGATGTTGATGATTTAAAGCAAATAGCTAGAAGTGTTATTATTGAATCCATAAGCAAATTTGATGGAGATCATGGTTCTGAGTTTATATTTTTTATTAGTACAAATGTTAAGAATAAACTTGGAACTATGTGTAAGAAGAAGGAGAATAGACTTGATTTTTCAAGTTTAGATAGTCCTATAGGGGAAGGTATTACTATTGGTGAGACAATTAAGGATGATATTTCCATAGAGGATGAATATGTTGAGAGAGAAAAAATGAGAGCTTTCGTAAAAGCTTTAGCTAATATTTCAAAAAGCGATAGGGATTTTATACTTTATGTATACAAAGATAGAGGAAACTTTCAGAAATATTGCCAAGAGCATAAGCATATTACCACTTATTCAAAAGCAAGATGGAGAAAGGAAAGAATACTAAAAAAACTTAGGGAAGAAATGAAAAACTTTGAATAA
PROTEIN sequence
Length: 216
MAEKKQRFINKTARELRLLGEKGNKEALNELIIRGKKGDKCAMAEIVSIYEGLIHKYSTRFFINGYDVDDLKQIARSVIIESISKFDGDHGSEFIFFISTNVKNKLGTMCKKKENRLDFSSLDSPIGEGITIGETIKDDISIEDEYVEREKMRAFVKALANISKSDRDFILYVYKDRGNFQKYCQEHKHITTYSKARWRKERILKKLREEMKNFE*