ggKbase home page

L3_072_362G1_scaffold_190_12

Organism: L3_072_362G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 15
Location: 12771..13250

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 159.0
  • Bit_score: 313
  • Evalue 1.50e-82
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=RLMH_BIFLS similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 159.0
  • Bit_score: 313
  • Evalue 1.10e-82
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 159.0
  • Bit_score: 313
  • Evalue 3.00e-83

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bifidobacterium longum → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 480
ATGAACATCGACATCGTCTGCGTCGGCCGGATCAAGGAACGGTATCTGACCGACGCCATCGCCGAATATTCCAAGCGGCTCTCGCGCTACTGCAAGCTCAACATCATCGAGGTGGCGGATGAGAAGACGCCCGAACACGCCTCTGAAGGCGTTGGCCGACAGATCAAGGCCAAAGAAGGCGAACGCATCGCCAAGCATCTGAAGGACGGGGCGTTTGTTATTGCCCTTGCCATCAACGGCAAGCAGCTGTCCAGTGAAGAATTGGCCGCCAAAATCAACGACCTTGGATTGCGTGGTACCAGCCATATTCAGCTGGTCATCGGCGGTTCAATCGGCCTTGACGACGCGATTCTGCGTCGTGCTGATTTTCTGCTGAGCTTCTCGAAGATGACGTTCCCGCATCAGCTCATGCGCGTGATTCTGTTGGAGCAGATCTATCGCGCGTACAAAATCAACGCCCACGAGCCGTATCACAAGTGA
PROTEIN sequence
Length: 160
MNIDIVCVGRIKERYLTDAIAEYSKRLSRYCKLNIIEVADEKTPEHASEGVGRQIKAKEGERIAKHLKDGAFVIALAINGKQLSSEELAAKINDLGLRGTSHIQLVIGGSIGLDDAILRRADFLLSFSKMTFPHQLMRVILLEQIYRAYKINAHEPYHK*