ggKbase home page

L3_072_362G1_public_UNK

In projects: L3_072_362G1_public
Displaying items 551-600 of 15582 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
L3_072_362G1_scaffold_13628
Species: Lactobacillus plantarum (66.67%)
3 1119 bp 33.42 2.68 60.05
L3_072_362G1_scaffold_13636
Species: Lachnospiraceae bacterium 2_1_46FAA (100%)
1 1119 bp 38.70 2.68 100.00
L3_072_362G1_scaffold_11263
Species: Roseburia inulinivorans (100%)
2 1287 bp 47.63 2.68 93.47
L3_072_362G1_scaffold_6064
Genus: Blautia (66.67%)
3 2071 bp 41.43 2.68 92.71
L3_072_362G1_scaffold_14599
Species: Anaerostipes caccae (50%)
2 1064 bp 45.49 2.68 99.81
L3_072_362G1_scaffold_15686
Species: Dorea sp. 5-2 (50%)
2 1009 bp 45.79 2.68 97.82
L3_072_362G1_scaffold_15689
Species: Haemophilus parainfluenzae (100%)
1 1009 bp 41.23 2.68 99.90
L3_072_362G1_scaffold_15694
Species: Clostridium beijerinckii (50%)
2 1009 bp 31.12 2.68 96.93
L3_072_362G1_scaffold_15699
Species: Streptococcus mitis (100%)
2 1008 bp 45.14 2.68 72.92
L3_072_362G1_scaffold_9531
Species: Roseburia inulinivorans (100%)
1 1453 bp 43.50 2.68 99.72
L3_072_362G1_scaffold_15707
Species: Eubacterium dolichum CAG:375 (100%)
2 1008 bp 36.90 2.68 71.73
L3_072_362G1_scaffold_14647
Species: Roseburia inulinivorans CAG:15 (100%)
1 1062 bp 41.24 2.68 99.72
L3_072_362G1_scaffold_15729
Species: Prevotella bivia (100%)
2 1007 bp 41.21 2.68 96.23
L3_072_362G1_scaffold_15740
Species: Lachnospiraceae bacterium 3_1_57FAA_CT1 (100%)
1 1006 bp 48.31 2.68 99.90
L3_072_362G1_scaffold_7881
Species: Anaerostipes sp. CAG:276 (100%)
2 1682 bp 44.23 2.68 78.12
L3_072_362G1_scaffold_11954
Species: Prevotella bivia (100%)
1 1232 bp 39.37 2.68 99.84
L3_072_362G1_scaffold_15746
Species: Lactobacillus reuteri (100%)
4 1006 bp 35.98 2.68 101.09
L3_072_362G1_scaffold_7887
Species: Clostridium sp. MSTE9 (100%)
3 1680 bp 52.50 2.68 73.93
L3_072_362G1_scaffold_15784
Species: Actinomyces sp. ICM54 (50%)
2 1004 bp 55.18 2.69 37.95
L3_072_362G1_scaffold_15796
Species: Clostridium sp. MSTE9 (100%)
2 1004 bp 58.47 2.69 92.03
L3_072_362G1_scaffold_15808
Species: Clostridium sp. MSTE9 (100%)
1 1003 bp 47.66 2.69 82.25
L3_072_362G1_scaffold_15819
Species: Enterococcus faecalis (100%)
2 1003 bp 34.30 2.69 60.72
L3_072_362G1_scaffold_13655
Species: Marvinbryantia formatexigens (50%)
2 1117 bp 34.65 2.69 96.42
L3_072_362G1_scaffold_13660
Species: Roseburia inulinivorans CAG:15 (50%)
2 1117 bp 39.84 2.69 82.99
L3_072_362G1_scaffold_13662
Species: Lactobacillus hokkaidonensis (50%)
2 1117 bp 39.21 2.69 99.64
L3_072_362G1_scaffold_13689
Species: [Clostridium] papyrosolvens (50%)
2 1116 bp 35.04 2.69 78.23
L3_072_362G1_scaffold_11297
Species: Enterococcus faecium (50%)
2 1282 bp 39.70 2.69 80.73
L3_072_362G1_scaffold_10665
Species: uncultured bacterium (50%)
2 1340 bp 42.16 2.69 100.08
L3_072_362G1_scaffold_13696
Species: Clostridium sp. CAG:242 (100%)
1 1115 bp 35.07 2.69 79.37
L3_072_362G1_scaffold_13700
Species: Enterococcus saccharolyticus (100%)
1 1115 bp 38.83 2.69 99.82
L3_072_362G1_scaffold_13707
Species: Firmicutes bacterium CAG:424 (100%)
2 1115 bp 51.84 2.69 102.24
L3_072_362G1_scaffold_11318
Species: [Clostridium] saccharolyticum (50%)
2 1281 bp 43.64 2.69 87.59
L3_072_362G1_scaffold_10713
Species: Desulfitobacterium hafniense (50%)
2 1336 bp 44.39 2.69 76.12
L3_072_362G1_scaffold_8311
Species: Parasutterella excrementihominis CAG:233 (100%)
2 1616 bp 38.92 2.69 44.55
L3_072_362G1_scaffold_12809
Species: Lactobacillus reuteri (100%)
2 1173 bp 37.51 2.69 101.54
L3_072_362G1_scaffold_12827
Species: Clostridium bartlettii CAG:1329 (66.67%)
3 1172 bp 34.73 2.69 93.43
L3_072_362G1_scaffold_9571
Species: Firmicutes bacterium CAG:424 (50%)
2 1449 bp 50.10 2.69 91.72
L3_072_362G1_scaffold_14678 3 1060 bp 39.43 2.69 86.89
L3_072_362G1_scaffold_6720
Species: Clostridium sp. MSTE9 (100%)
2 1896 bp 46.89 2.69 67.41
L3_072_362G1_scaffold_9092
Species: Roseburia inulinivorans CAG:15 (66.67%)
3 1506 bp 40.57 2.69 76.10
L3_072_362G1_scaffold_7956
Species: Enterococcus faecium (100%)
3 1669 bp 36.31 2.70 85.02
L3_072_362G1_scaffold_14768
Species: [Clostridium] saccharolyticum (100%)
1 1055 bp 47.20 2.70 99.81
L3_072_362G1_scaffold_14773
Species: Clostridium sp. MSTE9 (100%)
1 1055 bp 55.92 2.70 94.12
L3_072_362G1_scaffold_15851
Species: [Eubacterium] dolichum (100%)
1 1001 bp 39.36 2.70 88.41
L3_072_362G1_scaffold_14780
Species: Clostridium sp. MSTE9 (66.67%)
3 1055 bp 56.30 2.70 116.30
L3_072_362G1_scaffold_15864
Species: Clostridium perfringens (100%)
1 1001 bp 27.07 2.70 79.72
L3_072_362G1_scaffold_15882
Species: Coprobacillus sp. CAG:183 (66.67%)
3 1000 bp 32.30 2.70 99.30
L3_072_362G1_scaffold_13756
Species: Lactobacillus pentosus (100%)
1 1111 bp 45.63 2.70 46.98
L3_072_362G1_scaffold_13757
Species: Clostridium baratii (50%)
2 1111 bp 31.86 2.70 92.35
L3_072_362G1_scaffold_13771
Species: Roseburia inulinivorans (50%)
2 1111 bp 40.50 2.70 93.43
Displaying items 551-600 of 15582 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.