ggKbase home page

L3_079_000G1_scaffold_328_22

Organism: L3_079_000G1_public_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 18
Location: comp(22775..24124)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 449.0
  • Bit_score: 887
  • Evalue 4.20e-255
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9D4A8_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 99.3
  • Coverage: 449.0
  • Bit_score: 887
  • Evalue 3.00e-255
MiaB-like tRNA modifying enzyme YliG similarity KEGG
DB: KEGG
  • Identity: 74.3
  • Coverage: 448.0
  • Bit_score: 689
  • Evalue 3.40e-196

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Veillonella ratti → Veillonella → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1350
ATGAGTAAAAAATTAGGCTATGTGAGTTTAGGATGTGCCAAAAACCTGGTGGATACCGAAATTATGTTGGGTGCCCTTAAAGATAACGGCTATGAAATCACGGAAACCTTGGACGAAGCTGAGATTATCATAGTTAATACCTGTACGTTTATTGAAAAAGCAAAACAGGAGTCAATTAACACAATTTTACAGATGAGTGAATATAAGCAGTTTGGAAACTGTCGCGGCCTGATTGTGGCCGGATGTTTAAGTCAGCAGTACCAAGAAGAACTGTTTGCGGAAATTCCGGAGATTGATGCACTCATCGGTACCGGTTCTTGGAATCGTATTATGGAAGCCATTGAAGCGATTAATGACGGCAAACGCATCTGTATTATGGACTCGATTACCAATATTTACAACGAACGTATGCCACGTATGCAGACAACACCGACATATAGTGCGTATGTAAAAATTGCCGAAGGCTGTGATAACGGCTGTACCTTCTGTATCATTCCTAAAGTGCGCGGTGCTTATCGCAGCCGTACTATTGAATCTATCGTAGAAGAAGTAGAACGTCTGGCAGTTATGGGCGTTAAAGAAATTAACTTAATCGCTCAGGATACAACGAGTTACGGTTCCGATCTTAACAACGGTAAACCTATGTTGGCGGACTTATTAAAAGCGCTCGTTAAAGTAGACGGCATCGAATGGTATCGCTTATTGTACTTATATCCTAAGTATTTCACCGATGAATTATTGGATCTTATCGTAGCGGAACCAAAGATTTGTAATTATATCGACTTGCCGTTGCAGCACATTAATGACGATATTTTACGTCGAATGAACCGTAAAGACCGCAAGGCGGATATTGTAACCTTATTACAAAAAGTCCGCAGCAAAGCAAGTCATGTAACGCTTCGTACTTCCCTTATCGTAGGCTTCCCGGGCGAAACGGATGAACAGTTTGAAGAACTTTGTGAATTTGTAAAAGAAGTTCGTTTCGATAATATGGGTGTATTTACCTATTCACAAGAAGACGGTACGCCGGCCGGTGCCATGGCGGATCAGGTTCCGGAAGAAGTTAAAGAAGAACGCTATCATGCATTAATGGCGATTCAGGCGGCTATTTCCGAAGAAAACAATCGTGATTTGGAAGGCACCGAGCATGAAGCTATTATTGAAGAAATCAGCGAAGACGAACATGGTCATTTGTTGGCTAAAGGCCGTTTGGAAACGCAGGCACCGGATGTAGACGGTAATATGTATATCGAAGACTGCGAAGGCCTTGAAGTGGGGCAAATCGTACCGGTTACGGTAGCCCAAGGCTTTGCCTATGACGTGGTAGCTGAAGTTCGCGAAACAAAGTAA
PROTEIN sequence
Length: 450
MSKKLGYVSLGCAKNLVDTEIMLGALKDNGYEITETLDEAEIIIVNTCTFIEKAKQESINTILQMSEYKQFGNCRGLIVAGCLSQQYQEELFAEIPEIDALIGTGSWNRIMEAIEAINDGKRICIMDSITNIYNERMPRMQTTPTYSAYVKIAEGCDNGCTFCIIPKVRGAYRSRTIESIVEEVERLAVMGVKEINLIAQDTTSYGSDLNNGKPMLADLLKALVKVDGIEWYRLLYLYPKYFTDELLDLIVAEPKICNYIDLPLQHINDDILRRMNRKDRKADIVTLLQKVRSKASHVTLRTSLIVGFPGETDEQFEELCEFVKEVRFDNMGVFTYSQEDGTPAGAMADQVPEEVKEERYHALMAIQAAISEENNRDLEGTEHEAIIEEISEDEHGHLLAKGRLETQAPDVDGNMYIEDCEGLEVGQIVPVTVAQGFAYDVVAEVRETK*