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L3_079_029G1_scaffold_45_2

Organism: L3_079_029G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: comp(1480..1998)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RY79_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 172.0
  • Bit_score: 344
  • Evalue 3.60e-92
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EHL64792.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 172.0
  • Bit_score: 344
  • Evalue 5.10e-92
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 58.5
  • Coverage: 159.0
  • Bit_score: 198
  • Evalue 1.20e-48

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Taxonomy

Subdoligranulum sp. 4_3_54A2FAA → Subdoligranulum → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 519
GTGATTCCCGAACAGACGGCGCAATCTGCTGCGCCGCCCGATATGGAGCGTATCGTTGGCGCATACGGCAACGCTGTATTGCGCATGTGTTTTCTTTATTTGAAGGATTCACACCTTGCCGAGGATGCGTCACAAGAGACCTTTTTAAAAGTGTACCGCAACTACGCGCAATTCGACGGCACCGCCGGAGAAAAAACATGGGTAATGCGTATCGCTATCAATGTGTGTAAGGACTATCTGCGCAGTGCCTGGAACCGCAGGGTCAGCGTCGTGGAGGCATTGAATGAGATACCGGCCGCAGAAGATTCTCCCCATGAAGATGACACGCTCCTGCGGGAGATCATGAACCTGAAGCCTAAATACAAGGAAGTCATCCTGCTGTTTTATTATCAGGATATGAAAATCAGCGAGATTGCGCGCGTGCTGGACGCGCCGGAATCTACGGTTTCTGTGCGGCTCAAGCGTGCGCGCGAGCAATTGAAAAAGAGATTGGAGGGATGGTATGCCGACGGAAAATAA
PROTEIN sequence
Length: 173
VIPEQTAQSAAPPDMERIVGAYGNAVLRMCFLYLKDSHLAEDASQETFLKVYRNYAQFDGTAGEKTWVMRIAINVCKDYLRSAWNRRVSVVEALNEIPAAEDSPHEDDTLLREIMNLKPKYKEVILLFYYQDMKISEIARVLDAPESTVSVRLKRAREQLKKRLEGWYADGK*