ggKbase home page

L3_079_363G1_scaffold_13520_3

Organism: L3_079_363G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 16
Location: 681..1319

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BD24_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 69.5
  • Coverage: 213.0
  • Bit_score: 307
  • Evalue 6.10e-81
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.5
  • Coverage: 213.0
  • Bit_score: 307
  • Evalue 8.50e-81
RNA polymerase sigma-F factor similarity KEGG
DB: KEGG
  • Identity: 62.9
  • Coverage: 213.0
  • Bit_score: 282
  • Evalue 7.70e-74

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lachnospiraceae bacterium 2_1_46FAA → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 639
ATGGATCGTACCACAGAGCTGATCCGTAAGGCGCACGAGGGAGATCAGGAGGCAAGAACACGGCTGGTGGAAGAAAATGTGGGACTTGTCTGGTGTATTGTCCGGCGTTACAGCGGAAGAGGGACGGAGGCCGAGGATCTCTTTCAGATCGGAAGCATCGGCCTATTAAAAGCAATCGACAAGTTTGACCTGGCCTATGATGTCCGATTTTCTACTTACGCCGTGCCCATGATCTCCGGGGAGATCCGACGTTTCCTGCGGGACGATGGGATGCTGAAAGTCAGCCGTTCACTCAAAGAAATTTCCTACAAAGCATGTCAGGCAAAAGAGGAATTTGTCAGAAAGTACAACCGAGAACCAACCATCCAGGAACTCTCAGAGCTTTCCGGGGTGGGGAAAGAAGAGTTGGTACAGGCTCTGGAAGCCTCGTCGGAAGTGGAGTCTTTACACCGTCCGGTTTACAAAAAGGATGGAAGTGAGGTGGAGCTTCTGGAGAAGCTTGAGAAAGAGGAAAAGACAGAGGAGAAGATTATTGACCAGATATTTTTGTATTCTCTATTGGAGAAGCTCGGGAAGGAGGAACGGCAACTGATCTATCTTCGGTATTTTGAAAACAAGACACAGTCAGAGACAGGGAAA
PROTEIN sequence
Length: 213
MDRTTELIRKAHEGDQEARTRLVEENVGLVWCIVRRYSGRGTEAEDLFQIGSIGLLKAIDKFDLAYDVRFSTYAVPMISGEIRRFLRDDGMLKVSRSLKEISYKACQAKEEFVRKYNREPTIQELSELSGVGKEELVQALEASSEVESLHRPVYKKDGSEVELLEKLEKEEKTEEKIIDQIFLYSLLEKLGKEERQLIYLRYFENKTQSETGK